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The map label for this gene is 117676221

Identifier: 117676221

GI number: 117676221

Start: 166549

End: 167286

Strand: Reverse

Name: 117676221

Synonym: Shewana3_4282

Alternate gene names: NA

Gene position: 167286-166549 (Counterclockwise)

Preceding gene: 117676222

Following gene: 117676215

Centisome position: 59.97

GC content: 47.56

Gene sequence:

>738_bases
ATGCTCAAAGGTTTGTTTAATCTCCCCTTGCGAGCACTAGAAGGTTTTCTCAACTCAGTGTTTAGTTTGATGAGTCTGCA
ATTAACTTCACCTGGTTACAGCTGCATCAGCAAGCGGGCAAAGACAGTCAAAGTTAACTACCGCCCCCCTTGCCGAGGCG
CGATTGCTCACTTAGTTGTCGATGCCACAGGACTGAAAGTATATGGCGAAGGTGAATGGAAAATGCGTAAACATGGTAAG
GAAAAACGCCGAACTTGGCGTAAGTTGCACCTTGCGATAGATGCGGCCACACATGAAGTCATCGCAGCCGAAGTCAGTTT
AGAGAGTGTGGCAGATAGTGAGGTTCTCCCAACGTTATTAAACCCACTAAGGCGCAAGGTAAAACAAGTGTCAGCTGACG
GTGCTTATGACACCAAAAAATGTCATAAGCTGCTGAAACGCAGAGGGTGTAAACCTACGATACCGCCGCGAAAAAATGCA
GGTTATTGGGAAGAAGGTCATCCCAGAAACGAGGCCGTCAGCGCTCTGAAAAGTGATGAACTCAAACAATGGAAACAAGA
GAATGACTATCACCAACGCTCCCTGTCAGAAACAGCTATGTATCGTTACAAGCAACTGATTAGCCCGAAATTGAGCCTGC
GGGACTACAACGGCCAAGTCGGCGAGGCACTGGCTGGTGTGAAAGTGATGAACAAAGTCATAGGACTGGGTATGCCTATT
CGCCAGAGGGTCAATTAA

Upstream 100 bases:

>100_bases
GATAGACGAGCAGGCGCTCAACCTCTGGTGTCACACTGAACACCATGGTGGTCGAGGTCGGGGATTTCAATACAGTGACA
CGGCGATATAAACCGCCTTA

Downstream 100 bases:

>100_bases
TACCAGGAACCCTTTTAGGAAAAGGCATACCTAAGATTGATTTAGGCAACAACGCCCTTATCAGATGTTGCTCTTCACTT
CTAATATTTCAAATAAAAAC

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLKGLFNLPLRALEGFLNSVFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGK
EKRRTWRKLHLAIDAATHEVIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNA
GYWEEGHPRNEAVSALKSDELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPI
RQRVN

Sequences:

>Translated_245_residues
MLKGLFNLPLRALEGFLNSVFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGK
EKRRTWRKLHLAIDAATHEVIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNA
GYWEEGHPRNEAVSALKSDELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPI
RQRVN
>Mature_245_residues
MLKGLFNLPLRALEGFLNSVFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGK
EKRRTWRKLHLAIDAATHEVIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNA
GYWEEGHPRNEAVSALKSDELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPI
RQRVN

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 27676; Mature: 27676

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCC
>Mature Secondary Structure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HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]