| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676192
Identifier: 117676192
GI number: 117676192
Start: 129607
End: 131877
Strand: Reverse
Name: 117676192
Synonym: Shewana3_4253
Alternate gene names: NA
Gene position: 131877-129607 (Counterclockwise)
Preceding gene: 117676193
Following gene: 117676191
Centisome position: 47.28
GC content: 40.86
Gene sequence:
>2271_bases ATGACGAAAAGTAATTTGAGTGGCATTCGGCTTCTACACGTAAATCAAGACTCCGTAGCGGTATTCCCCACTTGGGAATA TGAGTTAGTCATAGACAATTTGGCCGTTTCCGTTGACCTCCAAAGACTAATGAATCATCAATGTGATCCCTCAGAAAAGA AGGTAGACAGGCAGCAACAAATTGTACGTTACGCTCAGACCTTTCGACATGAAATGGATAGAAAATCAGCGCATGCAACC TTGTATAACAATTTTCTAAAGTTCAAACAATATTTGGTATGGTGTGATCAAAATAGCTTACCCCCTTTTACTGAAGCGAC TTTGCGGCAATACCACAACTATTTATGGGAGCTTGTTCTGATAGGTAGTTCTTCTGTGCCAATTTGGCAAATGTTGGAAG GACATACCACTGGAGTAAAGGAGCGTACTGCAAACTACATCTTTTCCACAACAGAACAGGCATTAACATGGTGTGGTGAA ACTGCTTTTCAGTGGGGGAAACAGCTCAAGCAATTACGTGTAGGCAAAGTAGAATCTTATGAAGCATACTCAGAAAATGA ACTACCAGAGCTCCTTAGTCGGCTGTCTTCGTATTTTTTTCAGTTAGCCATTCCTTTATTGAGCGATACCCCGCCAGACA TGGTGTCTGTTGAAATCAATCAAACGTGCTTTTATGTACCTGTCCGTTCCTGCAATACAAAAGGTCGATCTAAGGGCGCT GAGTTGAATGTCGATACAGCATTTAACCAAGCGATGGCATGTGGTTATTACCTTCTCAGTTACTTTACGGCATTCAACAC GAGTCAATTAACTGATCTATGCCATCCTATAGAATGGCGAGAAGATAAGACCGGCGAATACTATAAATTGACAGCCTTCA AAAGAAGGGCCAATAAGGAAGTTCTCTCATTCGTGGGGGGAGAAATACATAAGAAGTCATTGCAGTTTATTCAAACGCTG ATTGCTCTTTCGTTGAAATATACCACAGATGCAAACAGCAAATTGCTCTATTGGCGGGGTAGAGATGGTAACCAGCGCAG TATAAGTTCGATTTTATTGGGTAAAATTGAACTTAGTAGCCGTCTGCTAATGCTATCAGACAAGGCAACTCAGAGTATCC CATATCTAATGTCTATTCATAGCAAATTTACTGAAACAGTTCCAAAGGGGTTTGTTGAATTCGATGAGCTAAAATTTGTG GACAGAACACTCGTTAAACGCAGGAAAACTGTTCGTCGTTTTTACAACCGTCGAACAATTGCTCTCAGCTTTGCCCTCTT GTTCGCAATCATTAAAGCCAACCCGAAAAATGGCACTAATACTGTTAACCTGAAGAATGTAGTGCTGCCATTAAAAATTA CCCGTACGGATGAGTTGCTAAAGATAGATTTTTCCTGTGAAGATGGAGGCCAAGGCAGTTTCTATGTTGATATTCAATAT GAAGCGTTCTTAGCACGAGTAGAAGCTTATGCTGCGTTCAGGCAAAGTAAACAAACATCAGCTCACTATCTATTGCCTCT AGGTTCCGAGAGAGATGCTATTCAATGGCAAGGACTGGCACCAAGCATGGCTTCGCTAGCGGATTACGGAATTCGTTCTG GCGAGTTTTTTGTCAACTTGGCATCCAGTCGTTTTAGGGAAACAGCAGCAAAACTTGCTAGGCGAAAAGCCAACAGAACA GAATTGCAAATATCACAAATATTGAATAATCAGTATCGAACCGTACTCAAGCATTATAGTGAGGGGAATCATTACGATAA CCAGTTGATAATCTCGCAGGGTTTATCCGTCATTGAAAAAATGAGTAAAGGTGGTTCCTTAGATCAATCTAAGGCTAAAG TTGCTACCGAGTTAGCGATTCCGGTCATCAAATATGATGAATTAATAGGTAGCCAAGCAAGTTTAAATGGCGTTGGTATG GCATGCTTTCAGAAATCACTGAGCACAGAAGAAAGCTATCTTGCTGCGAATGCTACCGCATGTTTTGACTATGAACGTTG TATCAAATGCCAGTATGCAAAGATCATAAATGATGTCGAACCACTCTATCGACTACTGTCCTTTTTGGAGTGTATGGAAG AAAGTTGGCTTTATTATCCAGAACGGTTTTCGAAAAATTTAGGGAAGGCTGTTGAATTATATAGAAAGGCGATTTCGAGT TCCCTATCACCTGACATCATTCAACGGGCGCGGTATAAATTAGATACTGTTGGTAGGCACATGCTGTGGGACAATCTAGA ACTATCTTCTCTAGGTTTTAAAGGAATATAA
Upstream 100 bases:
>100_bases ACATCAACATTCAAATATGTGGAGTTTATTGAGGCGAATGCTTTGATGCTAGATCACGCGCAACATATGAGTGATGTATT TCAAATATTTGGTGGCAGTA
Downstream 100 bases:
>100_bases CAATGATTGCTGGAAATAATCGATTAGCCACAGCCATTGAAATTGACTTATCCAGAGAACGATTGCTCTACCTAGCACAG CATGGACTATGGACCGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MTKSNLSGIRLLHVNQDSVAVFPTWEYELVIDNLAVSVDLQRLMNHQCDPSEKKVDRQQQIVRYAQTFRHEMDRKSAHAT LYNNFLKFKQYLVWCDQNSLPPFTEATLRQYHNYLWELVLIGSSSVPIWQMLEGHTTGVKERTANYIFSTTEQALTWCGE TAFQWGKQLKQLRVGKVESYEAYSENELPELLSRLSSYFFQLAIPLLSDTPPDMVSVEINQTCFYVPVRSCNTKGRSKGA ELNVDTAFNQAMACGYYLLSYFTAFNTSQLTDLCHPIEWREDKTGEYYKLTAFKRRANKEVLSFVGGEIHKKSLQFIQTL IALSLKYTTDANSKLLYWRGRDGNQRSISSILLGKIELSSRLLMLSDKATQSIPYLMSIHSKFTETVPKGFVEFDELKFV DRTLVKRRKTVRRFYNRRTIALSFALLFAIIKANPKNGTNTVNLKNVVLPLKITRTDELLKIDFSCEDGGQGSFYVDIQY EAFLARVEAYAAFRQSKQTSAHYLLPLGSERDAIQWQGLAPSMASLADYGIRSGEFFVNLASSRFRETAAKLARRKANRT ELQISQILNNQYRTVLKHYSEGNHYDNQLIISQGLSVIEKMSKGGSLDQSKAKVATELAIPVIKYDELIGSQASLNGVGM ACFQKSLSTEESYLAANATACFDYERCIKCQYAKIINDVEPLYRLLSFLECMEESWLYYPERFSKNLGKAVELYRKAISS SLSPDIIQRARYKLDTVGRHMLWDNLELSSLGFKGI
Sequences:
>Translated_756_residues MTKSNLSGIRLLHVNQDSVAVFPTWEYELVIDNLAVSVDLQRLMNHQCDPSEKKVDRQQQIVRYAQTFRHEMDRKSAHAT LYNNFLKFKQYLVWCDQNSLPPFTEATLRQYHNYLWELVLIGSSSVPIWQMLEGHTTGVKERTANYIFSTTEQALTWCGE TAFQWGKQLKQLRVGKVESYEAYSENELPELLSRLSSYFFQLAIPLLSDTPPDMVSVEINQTCFYVPVRSCNTKGRSKGA ELNVDTAFNQAMACGYYLLSYFTAFNTSQLTDLCHPIEWREDKTGEYYKLTAFKRRANKEVLSFVGGEIHKKSLQFIQTL IALSLKYTTDANSKLLYWRGRDGNQRSISSILLGKIELSSRLLMLSDKATQSIPYLMSIHSKFTETVPKGFVEFDELKFV DRTLVKRRKTVRRFYNRRTIALSFALLFAIIKANPKNGTNTVNLKNVVLPLKITRTDELLKIDFSCEDGGQGSFYVDIQY EAFLARVEAYAAFRQSKQTSAHYLLPLGSERDAIQWQGLAPSMASLADYGIRSGEFFVNLASSRFRETAAKLARRKANRT ELQISQILNNQYRTVLKHYSEGNHYDNQLIISQGLSVIEKMSKGGSLDQSKAKVATELAIPVIKYDELIGSQASLNGVGM ACFQKSLSTEESYLAANATACFDYERCIKCQYAKIINDVEPLYRLLSFLECMEESWLYYPERFSKNLGKAVELYRKAISS SLSPDIIQRARYKLDTVGRHMLWDNLELSSLGFKGI >Mature_755_residues TKSNLSGIRLLHVNQDSVAVFPTWEYELVIDNLAVSVDLQRLMNHQCDPSEKKVDRQQQIVRYAQTFRHEMDRKSAHATL YNNFLKFKQYLVWCDQNSLPPFTEATLRQYHNYLWELVLIGSSSVPIWQMLEGHTTGVKERTANYIFSTTEQALTWCGET AFQWGKQLKQLRVGKVESYEAYSENELPELLSRLSSYFFQLAIPLLSDTPPDMVSVEINQTCFYVPVRSCNTKGRSKGAE LNVDTAFNQAMACGYYLLSYFTAFNTSQLTDLCHPIEWREDKTGEYYKLTAFKRRANKEVLSFVGGEIHKKSLQFIQTLI ALSLKYTTDANSKLLYWRGRDGNQRSISSILLGKIELSSRLLMLSDKATQSIPYLMSIHSKFTETVPKGFVEFDELKFVD RTLVKRRKTVRRFYNRRTIALSFALLFAIIKANPKNGTNTVNLKNVVLPLKITRTDELLKIDFSCEDGGQGSFYVDIQYE AFLARVEAYAAFRQSKQTSAHYLLPLGSERDAIQWQGLAPSMASLADYGIRSGEFFVNLASSRFRETAAKLARRKANRTE LQISQILNNQYRTVLKHYSEGNHYDNQLIISQGLSVIEKMSKGGSLDQSKAKVATELAIPVIKYDELIGSQASLNGVGMA CFQKSLSTEESYLAANATACFDYERCIKCQYAKIINDVEPLYRLLSFLECMEESWLYYPERFSKNLGKAVELYRKAISSS LSPDIIQRARYKLDTVGRHMLWDNLELSSLGFKGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86486; Mature: 86355
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSNLSGIRLLHVNQDSVAVFPTWEYELVIDNLAVSVDLQRLMNHQCDPSEKKVDRQQQ CCCCCCCCEEEEEECCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHH IVRYAQTFRHEMDRKSAHATLYNNFLKFKQYLVWCDQNSLPPFTEATLRQYHNYLWELVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHEEEE IGSSSVPIWQMLEGHTTGVKERTANYIFSTTEQALTWCGETAFQWGKQLKQLRVGKVESY ECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EAYSENELPELLSRLSSYFFQLAIPLLSDTPPDMVSVEINQTCFYVPVRSCNTKGRSKGA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC ELNVDTAFNQAMACGYYLLSYFTAFNTSQLTDLCHPIEWREDKTGEYYKLTAFKRRANKE EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHH VLSFVGGEIHKKSLQFIQTLIALSLKYTTDANSKLLYWRGRDGNQRSISSILLGKIELSS HHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC RLLMLSDKATQSIPYLMSIHSKFTETVPKGFVEFDELKFVDRTLVKRRKTVRRFYNRRTI EEEEEECCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALSFALLFAIIKANPKNGTNTVNLKNVVLPLKITRTDELLKIDFSCEDGGQGSFYVDIQY HHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEH EAFLARVEAYAAFRQSKQTSAHYLLPLGSERDAIQWQGLAPSMASLADYGIRSGEFFVNL HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEH ASSRFRETAAKLARRKANRTELQISQILNNQYRTVLKHYSEGNHYDNQLIISQGLSVIEK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MSKGGSLDQSKAKVATELAIPVIKYDELIGSQASLNGVGMACFQKSLSTEESYLAANATA HHCCCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHH CFDYERCIKCQYAKIINDVEPLYRLLSFLECMEESWLYYPERFSKNLGKAVELYRKAISS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC SLSPDIIQRARYKLDTVGRHMLWDNLELSSLGFKGI CCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure TKSNLSGIRLLHVNQDSVAVFPTWEYELVIDNLAVSVDLQRLMNHQCDPSEKKVDRQQQ CCCCCCCEEEEEECCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHH IVRYAQTFRHEMDRKSAHATLYNNFLKFKQYLVWCDQNSLPPFTEATLRQYHNYLWELVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHEEEE IGSSSVPIWQMLEGHTTGVKERTANYIFSTTEQALTWCGETAFQWGKQLKQLRVGKVESY ECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EAYSENELPELLSRLSSYFFQLAIPLLSDTPPDMVSVEINQTCFYVPVRSCNTKGRSKGA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC ELNVDTAFNQAMACGYYLLSYFTAFNTSQLTDLCHPIEWREDKTGEYYKLTAFKRRANKE EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHH VLSFVGGEIHKKSLQFIQTLIALSLKYTTDANSKLLYWRGRDGNQRSISSILLGKIELSS HHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC RLLMLSDKATQSIPYLMSIHSKFTETVPKGFVEFDELKFVDRTLVKRRKTVRRFYNRRTI EEEEEECCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALSFALLFAIIKANPKNGTNTVNLKNVVLPLKITRTDELLKIDFSCEDGGQGSFYVDIQY HHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEH EAFLARVEAYAAFRQSKQTSAHYLLPLGSERDAIQWQGLAPSMASLADYGIRSGEFFVNL HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEH ASSRFRETAAKLARRKANRTELQISQILNNQYRTVLKHYSEGNHYDNQLIISQGLSVIEK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MSKGGSLDQSKAKVATELAIPVIKYDELIGSQASLNGVGMACFQKSLSTEESYLAANATA HHCCCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHH CFDYERCIKCQYAKIINDVEPLYRLLSFLECMEESWLYYPERFSKNLGKAVELYRKAISS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC SLSPDIIQRARYKLDTVGRHMLWDNLELSSLGFKGI CCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA