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The map label for this gene is 117676177

Identifier: 117676177

GI number: 117676177

Start: 109580

End: 109891

Strand: Reverse

Name: 117676177

Synonym: Shewana3_4237

Alternate gene names: NA

Gene position: 109891-109580 (Counterclockwise)

Preceding gene: 117676178

Following gene: 117676175

Centisome position: 39.4

GC content: 44.87

Gene sequence:

>312_bases
ATGACTGATGTACGCTTAGATAGAATGCACAAACTGGCTCAGCGTTTAGCTAAAAATGGCACGATGGATCAGCTAACCAT
GCGAAAAATCGATGCGCTCGCACTCAGCGCAAAGCTAGATGAAATGACAGCAGAGCGAATAAAGAATCTAAGAGAGCGTG
AGCACATTAGCCAAGGTGTCCTAGCTACGATTCTGAATATGAGCAACGAGAGCGTTCAAAAGTGGGAACAGGGAAAGTCT
AAGCCACAGGGTGCCGCGCTAAGATTGCTTAATATGATTGATAAGAAAGGCATTGAGTGCGTGCTTTCTTAA

Upstream 100 bases:

>100_bases
AACAACAAAAACTATAGTATTCTTTACCTTAGTTATTAGGAGGGAAGTGATGATGGTCTTACTTATATCATCAAAAGTGG
TGAGTTAAGAGAGGTTCTAT

Downstream 100 bases:

>100_bases
GAGATACAAGCCGCAGACGGAACCGATAGGTTCCGTTTTAGCAATTTCGCCGTAAACCCTCGCCCGATGAGGGCGGGGAT
ATAAGGCGTAAGACGCGATA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Cro/CI Family Transcriptional Regulator-Related Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Regulatory Protein; Helix-Turn-Helix Family Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTDVRLDRMHKLAQRLAKNGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQGKS
KPQGAALRLLNMIDKKGIECVLS

Sequences:

>Translated_103_residues
MTDVRLDRMHKLAQRLAKNGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQGKS
KPQGAALRLLNMIDKKGIECVLS
>Mature_102_residues
TDVRLDRMHKLAQRLAKNGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQGKSK
PQGAALRLLNMIDKKGIECVLS

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11675; Mature: 11544

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVRLDRMHKLAQRLAKNGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGV
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATILNMSNESVQKWEQGKSKPQGAALRLLNMIDKKGIECVLS
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure 
TDVRLDRMHKLAQRLAKNGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATILNMSNESVQKWEQGKSKPQGAALRLLNMIDKKGIECVLS
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA