| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676171
Identifier: 117676171
GI number: 117676171
Start: 105805
End: 106092
Strand: Direct
Name: 117676171
Synonym: Shewana3_4231
Alternate gene names: NA
Gene position: 105805-106092 (Clockwise)
Preceding gene: 117676170
Following gene: 117676172
Centisome position: 37.93
GC content: 47.22
Gene sequence:
>288_bases GTGGATATACTGAATATTGCTGACATCAATGTGGCTGAATACGTTGAATACGATACGCCAGATCAAACGCCTGTCTGGGC ATGGATTGAAGACAACGCGACGTATACGCATCGCAAGAACCATGACGCGGATAACTGCGGCATTTGGGAGTTTGTTGTGA ATACCTGCTGCATTACCGATGAAGATTGTGATGTATCAATCGAAGATGTGCCGCAAGAAATCAGGGGGGCGGTCCGAGAG GCCATTGATAATGGCGCAGCCTATATTCTGTTTCATCAAGGCACCTAA
Upstream 100 bases:
>100_bases GCAGTATCGAGCCTGGGAACCCCAAATTTTTGCGTGAATTTCCCGATATGAGTTAATGAGCATGAGTCAAATGGCTCAAT AATTCTGAGAGGGAAGGGTA
Downstream 100 bases:
>100_bases GCAGCTGCCTAAGATGTAATTTAGCCCCCTGATAGATTTGGTTCTATCGGGGGATTTTGTGTTAAATTGCTGATGAAACA GAGGAAAGCAAATGTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MDILNIADINVAEYVEYDTPDQTPVWAWIEDNATYTHRKNHDADNCGIWEFVVNTCCITDEDCDVSIEDVPQEIRGAVRE AIDNGAAYILFHQGT
Sequences:
>Translated_95_residues MDILNIADINVAEYVEYDTPDQTPVWAWIEDNATYTHRKNHDADNCGIWEFVVNTCCITDEDCDVSIEDVPQEIRGAVRE AIDNGAAYILFHQGT >Mature_95_residues MDILNIADINVAEYVEYDTPDQTPVWAWIEDNATYTHRKNHDADNCGIWEFVVNTCCITDEDCDVSIEDVPQEIRGAVRE AIDNGAAYILFHQGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10778; Mature: 10778
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILNIADINVAEYVEYDTPDQTPVWAWIEDNATYTHRKNHDADNCGIWEFVVNTCCITD CCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCC EDCDVSIEDVPQEIRGAVREAIDNGAAYILFHQGT CCCCCCHHHCCHHHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure MDILNIADINVAEYVEYDTPDQTPVWAWIEDNATYTHRKNHDADNCGIWEFVVNTCCITD CCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCC EDCDVSIEDVPQEIRGAVREAIDNGAAYILFHQGT CCCCCCHHHCCHHHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA