| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676138
Identifier: 117676138
GI number: 117676138
Start: 59875
End: 60306
Strand: Reverse
Name: 117676138
Synonym: Shewana3_4198
Alternate gene names: NA
Gene position: 60306-59875 (Counterclockwise)
Preceding gene: 117676139
Following gene: 117676137
Centisome position: 21.62
GC content: 42.13
Gene sequence:
>432_bases ATGGGCGCAGGTCATTTTTGTCTAGCAAACGCAAGTACCGTACATATCGAATTACCATTTGATGAAGCTTGGGAACCTTG GGAGTTGCACGACGAGACTCAGTGGTTTATTGAGAACGTAAAAAAGACAGTTCAGTCTCTTTTACCGAAATCATTCACTG AGCCAACATTTAATGTTCGCACTAGAGATGGAGAAATTATCGCTGATAACGGCTTTTATAAAGTGCTGTTAACCAGCTGG TGTAGCTACATCGCTATCAGCGTACAAATCAAAGAAGCGAATTGGTCAGAACCTTGGGAATTTAATCCTTTGGCTCTTTT CCATCATGCTTCTGCAAGTACAAAACTTTTCGATGAGTTAAGTGAGCAATATGAAGTCCGAATCGCGACAAGCGCTTGGA CTTCTGGTGCTTACATTCGAGAAGCCGCATAA
Upstream 100 bases:
>100_bases GCTTTAAGTACCGCTTAAAGCCAAAACCCTTGAGGTGTGCATAGCCTCAAGGCCTGCGCACCATTTTACTTTTTTACTAA TTAATTTTTAGGAGTGAGTT
Downstream 100 bases:
>100_bases ATATAAATCAACATAGATTAACCATCCCTAGGGAATTTTGCCCTAGGGCGGATTCCCTTTAATTAACTTTATAGGTATCC GCTATGAAAAAATTCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGAGHFCLANASTVHIELPFDEAWEPWELHDETQWFIENVKKTVQSLLPKSFTEPTFNVRTRDGEIIADNGFYKVLLTSW CSYIAISVQIKEANWSEPWEFNPLALFHHASASTKLFDELSEQYEVRIATSAWTSGAYIREAA
Sequences:
>Translated_143_residues MGAGHFCLANASTVHIELPFDEAWEPWELHDETQWFIENVKKTVQSLLPKSFTEPTFNVRTRDGEIIADNGFYKVLLTSW CSYIAISVQIKEANWSEPWEFNPLALFHHASASTKLFDELSEQYEVRIATSAWTSGAYIREAA >Mature_142_residues GAGHFCLANASTVHIELPFDEAWEPWELHDETQWFIENVKKTVQSLLPKSFTEPTFNVRTRDGEIIADNGFYKVLLTSWC SYIAISVQIKEANWSEPWEFNPLALFHHASASTKLFDELSEQYEVRIATSAWTSGAYIREAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16372; Mature: 16241
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGHFCLANASTVHIELPFDEAWEPWELHDETQWFIENVKKTVQSLLPKSFTEPTFNVR CCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE TRDGEIIADNGFYKVLLTSWCSYIAISVQIKEANWSEPWEFNPLALFHHASASTKLFDEL ECCCCEEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH SEQYEVRIATSAWTSGAYIREAA HHHEEEEEEECCCCCCCEEEECC >Mature Secondary Structure GAGHFCLANASTVHIELPFDEAWEPWELHDETQWFIENVKKTVQSLLPKSFTEPTFNVR CCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE TRDGEIIADNGFYKVLLTSWCSYIAISVQIKEANWSEPWEFNPLALFHHASASTKLFDEL ECCCCEEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH SEQYEVRIATSAWTSGAYIREAA HHHEEEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA