| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676137
Identifier: 117676137
GI number: 117676137
Start: 59003
End: 59368
Strand: Reverse
Name: 117676137
Synonym: Shewana3_4197
Alternate gene names: NA
Gene position: 59368-59003 (Counterclockwise)
Preceding gene: 117676138
Following gene: 117676136
Centisome position: 21.28
GC content: 47.54
Gene sequence:
>366_bases ATGAGTAACCCTACGGCCCTAGTTGGGGTCATTCTATTTGCCTGGTTCCCTTCGGATGAACATCCTAATCGGCCAGGCCC CAAATTCCGTCCTGTTTTAGTTGTTGATGCAGACCCGTCTGGTACACAGTTGCGCTTGGCTTACGGCACAAGTCAACGAG TGGACGAAAACCACCGGGGAGAGCTCACTTTTAGAAGTCACGAGATGGAAAAATTAGACAAAGATACAAAATTTTGCCTC GGAAGAACTCGCTGGGTTCCTGTGACACCGGAATACTTTGTCAAAGATGGCAAACAAGTGATCATCGGCACCATACCTAA AAATCGCGTTAGAGACCTCTATTTGCGAGTACAGGAAGTGCTGTAA
Upstream 100 bases:
>100_bases GATCGCAGGAGAGTCCATTGAGGATTTCTTCGCGAGAAATGGGGTATTCAGCAAACCATAATTCAATCAAATTATTTCCT ACAACTAGGTCGAGGTTCCT
Downstream 100 bases:
>100_bases CCTTAACGAATTTGATTTTTAAACCCTTGGGGGTGAGTTTTGTCCCCATGGGGCAGACTCACCCTTTTATTTTAATGCCT TACGGGCATTTCTAAAATTT
Product: putative toxin of addiction system
Products: NA
Alternate protein names: Xin Of Addiction System
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSNPTALVGVILFAWFPSDEHPNRPGPKFRPVLVVDADPSGTQLRLAYGTSQRVDENHRGELTFRSHEMEKLDKDTKFCL GRTRWVPVTPEYFVKDGKQVIIGTIPKNRVRDLYLRVQEVL
Sequences:
>Translated_121_residues MSNPTALVGVILFAWFPSDEHPNRPGPKFRPVLVVDADPSGTQLRLAYGTSQRVDENHRGELTFRSHEMEKLDKDTKFCL GRTRWVPVTPEYFVKDGKQVIIGTIPKNRVRDLYLRVQEVL >Mature_120_residues SNPTALVGVILFAWFPSDEHPNRPGPKFRPVLVVDADPSGTQLRLAYGTSQRVDENHRGELTFRSHEMEKLDKDTKFCLG RTRWVPVTPEYFVKDGKQVIIGTIPKNRVRDLYLRVQEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13891; Mature: 13760
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTALVGVILFAWFPSDEHPNRPGPKFRPVLVVDADPSGTQLRLAYGTSQRVDENHRG CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCC ELTFRSHEMEKLDKDTKFCLGRTRWVPVTPEYFVKDGKQVIIGTIPKNRVRDLYLRVQEV CEEECCCHHHHHCCCCHHHCCCCEEEECCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC L C >Mature Secondary Structure SNPTALVGVILFAWFPSDEHPNRPGPKFRPVLVVDADPSGTQLRLAYGTSQRVDENHRG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCC ELTFRSHEMEKLDKDTKFCLGRTRWVPVTPEYFVKDGKQVIIGTIPKNRVRDLYLRVQEV CEEECCCHHHHHCCCCHHHCCCCEEEECCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA