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The map label for this gene is ydjM [H]

Identifier: 117676126

GI number: 117676126

Start: 51416

End: 51769

Strand: Reverse

Name: ydjM [H]

Synonym: Shewana3_4186

Alternate gene names: 117676126

Gene position: 51769-51416 (Counterclockwise)

Preceding gene: 117676127

Following gene: 117676125

Centisome position: 18.56

GC content: 44.35

Gene sequence:

>354_bases
ATGTTACCCGTGGTGGCGATAGCGTCGTTATTACCTGACATAGATCATCCTGAGTCGAAATTGGGAAGAAGGATTAAACC
AATATCAACGATTCTTTCGCTCTTCTCACATCGTGGTATCACTCACTCATTGTGGGCTGTTGGGCTAATGGTCTGGCTTT
TAGCCAGCCATCAAGCTGACTCTATCGCATCGCAAGCCCTAGTCATTGGCTATTTAAGTCATTTACTTGGGGACGCGGTG
ACTCCTGCCGGAATTAGACCATTTTGGCCATTGGGTAGAGCGCAACGAATTGGGCTAAATCATGCAGTAGTAGCAAGTGT
TGGTATTATTTTATTTTTAAGATGGATGTATTGA

Upstream 100 bases:

>100_bases
TGCTGCTCATGTGGGCCTAGGAGTGGGTTGTTGGGGCGTTTACGCTGCTATCGTCAACTCCTATGCCCCTGAGACAATCG
GTGTTGTAGATGCCTGTTTG

Downstream 100 bases:

>100_bases
AGATGGGAAGTTCTGGTGCGCAAAACGTAGTGATGATGTTTAGAGCTCGCGAAGAGAAAACTCTCAGAGATTCAAGATTT
TCTGAGATTGTTGATTCTGC

Product: membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLPVVAIASLLPDIDHPESKLGRRIKPISTILSLFSHRGITHSLWAVGLMVWLLASHQADSIASQALVIGYLSHLLGDAV
TPAGIRPFWPLGRAQRIGLNHAVVASVGIILFLRWMY

Sequences:

>Translated_117_residues
MLPVVAIASLLPDIDHPESKLGRRIKPISTILSLFSHRGITHSLWAVGLMVWLLASHQADSIASQALVIGYLSHLLGDAV
TPAGIRPFWPLGRAQRIGLNHAVVASVGIILFLRWMY
>Mature_117_residues
MLPVVAIASLLPDIDHPESKLGRRIKPISTILSLFSHRGITHSLWAVGLMVWLLASHQADSIASQALVIGYLSHLLGDAV
TPAGIRPFWPLGRAQRIGLNHAVVASVGIILFLRWMY

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yvsG [H]

Homologues:

Organism=Escherichia coli, GI226510947, Length=101, Percent_Identity=44.5544554455446, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404
- InterPro:   IPR016956 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 12779; Mature: 12779

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVVAIASLLPDIDHPESKLGRRIKPISTILSLFSHRGITHSLWAVGLMVWLLASHQAD
CCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
SIASQALVIGYLSHLLGDAVTPAGIRPFWPLGRAQRIGLNHAVVASVGIILFLRWMY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLPVVAIASLLPDIDHPESKLGRRIKPISTILSLFSHRGITHSLWAVGLMVWLLASHQAD
CCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
SIASQALVIGYLSHLLGDAVTPAGIRPFWPLGRAQRIGLNHAVVASVGIILFLRWMY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]