Click here to switch to the map view.

The map label for this gene is 117676119

Identifier: 117676119

GI number: 117676119

Start: 45611

End: 46507

Strand: Reverse

Name: 117676119

Synonym: Shewana3_4179

Alternate gene names: NA

Gene position: 46507-45611 (Counterclockwise)

Preceding gene: 117676120

Following gene: 117676118

Centisome position: 16.67

GC content: 48.61

Gene sequence:

>897_bases
ATGGAATTACAAGTAAAGCCGACAACCCGTTTAAAAACACCCTTCACGATTGCGTCTAACGTGACATCGACTTTCACCGT
TGAGGCGTATGTTGAACATGATTCGATAACCATTGCCACTAATTCGGTGAATCAAGGCGTGAAAGCGCTGGAAGTGATCT
CGCGTGACGACAACTCCGTGTGGGAGGTCATTCAAAATCGATTCGCGGTGTGGACTCAGCATTATATCCAGTTAGGGGCT
TACTTCTTACAAGAAGGGACGTTGCCGCTGCCAGCGACCAAAGCGAGTGAGCAATTAGAGATCCTGAAGTCAGTGCCGGA
AATCTGTGCCGGTGATTGGATTGTAGAGAGCGGAACTAGCCAGATTTTTACGCTGGTTAAAGAGCAGGGCAAGGTGAGTG
TATTAACCACGCATCACTGTGAGAGCTTCCATGTTTGCACAAAATTGATTGCGTGGTTTGTGGGCCAAGAGCAATTCACG
TCTGCGATGTTTGAGGAATCAAATAGTGGTTATCTCATTTTGGACGTGGCAGAGGACGGGGAGCCGTTAATGCCCGAGTT
AACCCCAAGTCTGAATGCACGTAAAGCAGCTGCAGGGCGTTCACTCGCTGCACTACGTCATTTGCCCTCGGTTGATATTC
GGGTGCCGGTGATGGCTCCTTTGCCAAATATCGAAGTGCTGGCCAAGATGCCGACAGCCTATGAAGTGCTGAGCAAAGTT
AGCGCCTTACAGCGCAGAGTCGTGGCGATTGGGACTGTGGTGAAATCGAACCAGACAAAAGAGATTATGGGGAACACATT
ACAGGGGTTGGCGGGTTTAAGAGCCTCTGGTTTGTACGATGTGGAGCTTATTCTAAAAGGTAAAAAATTGCTTCGTTGGA
AGTATCTGTCAGAGTGA

Upstream 100 bases:

>100_bases
GCCACAAGAGCTTGGAATGAATTTTTTGTAGGGATGATCTTAGCTAAAACAGTGAGACTTTCCGAAAAAGCATGGTCAGA
AGCGGCTTAAGAGGCGAAAA

Downstream 100 bases:

>100_bases
TTGGACATCAAGAGAGGTCAACGTGAACGCAAAGCAAGTCAAAGTGTATATGGGACAGCATCAGCCATTTGCGAGCCAAT
TCCCGCTAACGCTAGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MELQVKPTTRLKTPFTIASNVTSTFTVEAYVEHDSITIATNSVNQGVKALEVISRDDNSVWEVIQNRFAVWTQHYIQLGA
YFLQEGTLPLPATKASEQLEILKSVPEICAGDWIVESGTSQIFTLVKEQGKVSVLTTHHCESFHVCTKLIAWFVGQEQFT
SAMFEESNSGYLILDVAEDGEPLMPELTPSLNARKAAAGRSLAALRHLPSVDIRVPVMAPLPNIEVLAKMPTAYEVLSKV
SALQRRVVAIGTVVKSNQTKEIMGNTLQGLAGLRASGLYDVELILKGKKLLRWKYLSE

Sequences:

>Translated_298_residues
MELQVKPTTRLKTPFTIASNVTSTFTVEAYVEHDSITIATNSVNQGVKALEVISRDDNSVWEVIQNRFAVWTQHYIQLGA
YFLQEGTLPLPATKASEQLEILKSVPEICAGDWIVESGTSQIFTLVKEQGKVSVLTTHHCESFHVCTKLIAWFVGQEQFT
SAMFEESNSGYLILDVAEDGEPLMPELTPSLNARKAAAGRSLAALRHLPSVDIRVPVMAPLPNIEVLAKMPTAYEVLSKV
SALQRRVVAIGTVVKSNQTKEIMGNTLQGLAGLRASGLYDVELILKGKKLLRWKYLSE
>Mature_298_residues
MELQVKPTTRLKTPFTIASNVTSTFTVEAYVEHDSITIATNSVNQGVKALEVISRDDNSVWEVIQNRFAVWTQHYIQLGA
YFLQEGTLPLPATKASEQLEILKSVPEICAGDWIVESGTSQIFTLVKEQGKVSVLTTHHCESFHVCTKLIAWFVGQEQFT
SAMFEESNSGYLILDVAEDGEPLMPELTPSLNARKAAAGRSLAALRHLPSVDIRVPVMAPLPNIEVLAKMPTAYEVLSKV
SALQRRVVAIGTVVKSNQTKEIMGNTLQGLAGLRASGLYDVELILKGKKLLRWKYLSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32871; Mature: 32871

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQVKPTTRLKTPFTIASNVTSTFTVEAYVEHDSITIATNSVNQGVKALEVISRDDNSV
CCEECCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHHCCCHHH
WEVIQNRFAVWTQHYIQLGAYFLQEGTLPLPATKASEQLEILKSVPEICAGDWIVESGTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCH
QIFTLVKEQGKVSVLTTHHCESFHVCTKLIAWFVGQEQFTSAMFEESNSGYLILDVAEDG
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCC
EPLMPELTPSLNARKAAAGRSLAALRHLPSVDIRVPVMAPLPNIEVLAKMPTAYEVLSKV
CCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCCHHHEECCCHHHHHHHHH
SALQRRVVAIGTVVKSNQTKEIMGNTLQGLAGLRASGLYDVELILKGKKLLRWKYLSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHEECCCC
>Mature Secondary Structure
MELQVKPTTRLKTPFTIASNVTSTFTVEAYVEHDSITIATNSVNQGVKALEVISRDDNSV
CCEECCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHHCCCHHH
WEVIQNRFAVWTQHYIQLGAYFLQEGTLPLPATKASEQLEILKSVPEICAGDWIVESGTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCH
QIFTLVKEQGKVSVLTTHHCESFHVCTKLIAWFVGQEQFTSAMFEESNSGYLILDVAEDG
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCC
EPLMPELTPSLNARKAAAGRSLAALRHLPSVDIRVPVMAPLPNIEVLAKMPTAYEVLSKV
CCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCCHHHEECCCHHHHHHHHH
SALQRRVVAIGTVVKSNQTKEIMGNTLQGLAGLRASGLYDVELILKGKKLLRWKYLSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA