| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
Click here to switch to the map view.
The map label for this gene is 117676081
Identifier: 117676081
GI number: 117676081
Start: 1030
End: 1248
Strand: Direct
Name: 117676081
Synonym: Shewana3_4141
Alternate gene names: NA
Gene position: 1030-1248 (Clockwise)
Preceding gene: NA
Following gene: 117676089
Centisome position: 0.37
GC content: 44.29
Gene sequence:
>219_bases ATGTCTAAACCTAGCACGATTTTCATCGGCAAGGATGTGCACAAAGAAACCGTGGATGTTGCGTTTGTTTCTACCAACAA TAGTGCCGTCTCTTTTTACGACACTATCCCTACCAACAGTCGTTCAGCTCTCAACCTTATCAAGAAGTTTGCATATAAAG CCAGTCACTTATGTGTGGTTTATGAAGCAGGCCCCTGCGGCTATTGGCTCTACAGATAG
Upstream 100 bases:
>100_bases TCCCTGAACGAGGTGTCGACCGCCTTCGTTGTCGTGGGGTAGTCGAACCAGAGCCACACTGTTAATGAGCATTAATCGTT AACAGAAACAGGAGATCGAC
Downstream 100 bases:
>100_bases TTAAAACACAAGGGTTGACACATTTGGTCATCTTATCGCTGTTTATTGAATAACTGCGAATGCTGCTTTGGCTGGATCTA TTCAGTCGTCTTTGCTAGGG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSKPSTIFIGKDVHKETVDVAFVSTNNSAVSFYDTIPTNSRSALNLIKKFAYKASHLCVVYEAGPCGYWLYR
Sequences:
>Translated_72_residues MSKPSTIFIGKDVHKETVDVAFVSTNNSAVSFYDTIPTNSRSALNLIKKFAYKASHLCVVYEAGPCGYWLYR >Mature_71_residues SKPSTIFIGKDVHKETVDVAFVSTNNSAVSFYDTIPTNSRSALNLIKKFAYKASHLCVVYEAGPCGYWLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8052; Mature: 7921
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPSTIFIGKDVHKETVDVAFVSTNNSAVSFYDTIPTNSRSALNLIKKFAYKASHLCVV CCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE YEAGPCGYWLYR EECCCCEEEEEC >Mature Secondary Structure SKPSTIFIGKDVHKETVDVAFVSTNNSAVSFYDTIPTNSRSALNLIKKFAYKASHLCVV CCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE YEAGPCGYWLYR EECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA