The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621623

Identifier: 117621623

GI number: 117621623

Start: 39056

End: 39328

Strand: Direct

Name: 117621623

Synonym: BAPKO_2052

Alternate gene names: NA

Gene position: 39056-39328 (Clockwise)

Preceding gene: 117621622

Following gene: 117621624

Centisome position: 65.14

GC content: 25.27

Gene sequence:

>273_bases
GTGAGAGAAGTTTTTTTAATTTTTATTTTATTTTTTTGTTTAGCTTGTAATTTACATTCCTATACTATTGGGAATGATGA
AATTGTTAAGGTTGAAATTTTCAATTTTAAACTAAATCAGCAAAGATCTTTTGAAGAATTGGAGAGAGATTTAAAACTTT
TCATTCAAAAGATAGGTTCAAAAAATGTTTTAGACATTAATCATAAAATCTTGTTCACAGGAGTAGAGGTTGTAGTGATG
GTGATTTATAAATCAAATCCAGAAGAAGATTAA

Upstream 100 bases:

>100_bases
ATATTGAGCACAATATAACTTTTAATGGTATTTCTGTAATGGTGACCTATAAAGTTAAAAAGCGCAGTTAGCAAGATTGC
AGGTTTAAGGTGAAAGATTT

Downstream 100 bases:

>100_bases
ATTTTGCTGGTGATGTTAATTATTAGTTTGTTAATTTAAAAAAGGAGTTTTATTTAAAAAGGATGTTAATATTTCAATAT
GATTTTAAGATTGAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MREVFLIFILFFCLACNLHSYTIGNDEIVKVEIFNFKLNQQRSFEELERDLKLFIQKIGSKNVLDINHKILFTGVEVVVM
VIYKSNPEED

Sequences:

>Translated_90_residues
MREVFLIFILFFCLACNLHSYTIGNDEIVKVEIFNFKLNQQRSFEELERDLKLFIQKIGSKNVLDINHKILFTGVEVVVM
VIYKSNPEED
>Mature_90_residues
MREVFLIFILFFCLACNLHSYTIGNDEIVKVEIFNFKLNQQRSFEELERDLKLFIQKIGSKNVLDINHKILFTGVEVVVM
VIYKSNPEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10629; Mature: 10629

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVFLIFILFFCLACNLHSYTIGNDEIVKVEIFNFKLNQQRSFEELERDLKLFIQKIGS
CCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
KNVLDINHKILFTGVEVVVMVIYKSNPEED
CCEEECCCEEEEECHHHEEEEEECCCCCCC
>Mature Secondary Structure
MREVFLIFILFFCLACNLHSYTIGNDEIVKVEIFNFKLNQQRSFEELERDLKLFIQKIGS
CCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
KNVLDINHKILFTGVEVVVMVIYKSNPEED
CCEEECCCEEEEECHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA