| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621618
Identifier: 117621618
GI number: 117621618
Start: 35510
End: 35728
Strand: Direct
Name: 117621618
Synonym: BAPKO_2047
Alternate gene names: NA
Gene position: 35510-35728 (Clockwise)
Preceding gene: 117621617
Following gene: 117621619
Centisome position: 59.22
GC content: 31.96
Gene sequence:
>219_bases ATGAATAAGGCAGAGATTGCAACCAATTATTTTAAATACATAGATTATTTGACAAGAGAAGCTAATAAGTACTATTTCCC TATTGTAATGGGCATTTGCACATACAAAGACGTTAAGAAAATGCGCTACAAAGAGCTTTTAGAGGTTAATCGAGTAGCTA ATTTAAAGCTTAACAAAGAAATGTACGAACGGTTTTTATCCTTTAGTGGCATGCTTTAA
Upstream 100 bases:
>100_bases TGGAGTTATGATTTTTTAATTACAAATAGCAACTCTTTAGGCGCAAATCAAGAAGATTCTCTAGAAACCGGTCTTGAGTC TTTATTGCAAGAAGGTGTTA
Downstream 100 bases:
>100_bases AGGTTTTTATGTACGAAGAAAACAATAATGAGAATAAATTTACAATTACATTAGAAGGCGTGCTTGACAGAAATGCCACT AAGAGTAATTTAAAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MNKAEIATNYFKYIDYLTREANKYYFPIVMGICTYKDVKKMRYKELLEVNRVANLKLNKEMYERFLSFSGML
Sequences:
>Translated_72_residues MNKAEIATNYFKYIDYLTREANKYYFPIVMGICTYKDVKKMRYKELLEVNRVANLKLNKEMYERFLSFSGML >Mature_72_residues MNKAEIATNYFKYIDYLTREANKYYFPIVMGICTYKDVKKMRYKELLEVNRVANLKLNKEMYERFLSFSGML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8753; Mature: 8753
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAEIATNYFKYIDYLTREANKYYFPIVMGICTYKDVKKMRYKELLEVNRVANLKLNKE CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHH MYERFLSFSGML HHHHHHHHCCCC >Mature Secondary Structure MNKAEIATNYFKYIDYLTREANKYYFPIVMGICTYKDVKKMRYKELLEVNRVANLKLNKE CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHH MYERFLSFSGML HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA