| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621585
Identifier: 117621585
GI number: 117621585
Start: 10911
End: 11330
Strand: Direct
Name: 117621585
Synonym: BAPKO_2014
Alternate gene names: NA
Gene position: 10911-11330 (Clockwise)
Preceding gene: 117621584
Following gene: 117621586
Centisome position: 18.2
GC content: 27.86
Gene sequence:
>420_bases ATGAATAGTAAAATAAATATCAACTCTGGCGTTGAAGCTTTAAATAATTTATATGATTTTCTAAAAAGTGGCGATTCTCC AACAGAAATTAAAGTAGAAAAGGGAATATATTTAGGACTCAATCTCTACAGCCTAATAATGAGCATTTACAAAGACACAA TCAACACCCTTGAAAAAGAAGAATCAATAAAAATATTAAATGACATTGAAAATGTTAATAATAAAATTACTCAACTTATA TTAAGCATCAATGATGAGCGAGATGTAGGCATTATTGAACATTTAAGAGAAGAAAGAAATGAACTAATGAAAATCAAAAC TAAAGCACTCCAAGAACAAATACAAGGGTCCTTAGAAGACTTAAAAACCAACACTAATAACAAAGCCCAAGACTTAAAAG GAGATAAAATTGAAAATTAA
Upstream 100 bases:
>100_bases CAATAATGCCAATGATTTTAGCAATAAAGCCGCAGTTTAAAGAAAGCTTAAACTTTCTTATTAAAAAGCTCTTAAAAAAT ACAAATAAAAAGGAAACCAA
Downstream 100 bases:
>100_bases AAATTTCCCCTTTTTGTTTTTATTAAACACGCTTGTAATCTTTTCATGTTCTACAATAGCAAGCCTCCCAGAAGAGCCAT CATCTCCAAAAGAGACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNSKININSGVEALNNLYDFLKSGDSPTEIKVEKGIYLGLNLYSLIMSIYKDTINTLEKEESIKILNDIENVNNKITQLI LSINDERDVGIIEHLREERNELMKIKTKALQEQIQGSLEDLKTNTNNKAQDLKGDKIEN
Sequences:
>Translated_139_residues MNSKININSGVEALNNLYDFLKSGDSPTEIKVEKGIYLGLNLYSLIMSIYKDTINTLEKEESIKILNDIENVNNKITQLI LSINDERDVGIIEHLREERNELMKIKTKALQEQIQGSLEDLKTNTNNKAQDLKGDKIEN >Mature_139_residues MNSKININSGVEALNNLYDFLKSGDSPTEIKVEKGIYLGLNLYSLIMSIYKDTINTLEKEESIKILNDIENVNNKITQLI LSINDERDVGIIEHLREERNELMKIKTKALQEQIQGSLEDLKTNTNNKAQDLKGDKIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15851; Mature: 15851
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKININSGVEALNNLYDFLKSGDSPTEIKVEKGIYLGLNLYSLIMSIYKDTINTLEKE CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH ESIKILNDIENVNNKITQLILSINDERDVGIIEHLREERNELMKIKTKALQEQIQGSLED HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKTNTNNKAQDLKGDKIEN HHCCCCCCHHHCCCCCCCC >Mature Secondary Structure MNSKININSGVEALNNLYDFLKSGDSPTEIKVEKGIYLGLNLYSLIMSIYKDTINTLEKE CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH ESIKILNDIENVNNKITQLILSINDERDVGIIEHLREERNELMKIKTKALQEQIQGSLED HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKTNTNNKAQDLKGDKIEN HHCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA