| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621582
Identifier: 117621582
GI number: 117621582
Start: 8995
End: 9621
Strand: Direct
Name: 117621582
Synonym: BAPKO_2011
Alternate gene names: NA
Gene position: 8995-9621 (Clockwise)
Preceding gene: 117621581
Following gene: 117621583
Centisome position: 15.0
GC content: 25.52
Gene sequence:
>627_bases ATGAACAAAGAGATACCAAAATTTTTAGAAAATACTCAAATTGAAAAGTTTATCTACAATGAGCTTAATTACAAAAAAGA GATATTAAAAGAACTAAAAGAACTGCTTGAAAACTTCAAAACAATCAATGTTAAAAACAGTATTAACTCTAAATATATTA CATTACTAATGCTTTCAATATTTAACGCATTCCACTTTAAAAAAGAGTTAGATAAAAATCTTGTCAATTCTTTAAACGCC ATTATTTTTGCAATCAAATCTATTGGTACTGACGAGAGCTTTATTGTGCTCTTTAAAGCCTTTTTACATGCAAATATTGA AGTCAGCTCAAACCAAGACGCTCCAGGAGAAATAATAATCAAATTACTTGGAAACATTAAATCCCCGATTGAATTTAATA TTGCAGCAAAAAATCAAAATAAACTAAAAAAAATAACTATAAAACACGCTGGATTTAAAAAAGCTCTAATTTCTCACCAT ATGCCCAAAGATTACAAAAATTCAGTATATGAGTTTATTAAAATATTAATTCCTATAGGAAGAATAGTAAAAATCATAGA CAAAGAACAAATAGAAATAAAAAGTACAAGAACAAAACAATTTTACAAAGTAGATCATTTTTTTTGA
Upstream 100 bases:
>100_bases GTGAGAGTGATTTTACATTCAATAAAGACGAAAACATTAAAGAGAATGAAATTATCATTTTTGATACAAACAAAAGACTG CTTATTAACAGAGAATAAAA
Downstream 100 bases:
>100_bases TCCACCAAAGTATAAATAATAATTTAAAACTAAAAGAAATTTAAAAGGAGAATTTATGAATACCAACGAACCACAAGAGA GTGTACAAATAAAAGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF
Sequences:
>Translated_208_residues MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF >Mature_208_residues MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24247; Mature: 24247
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSI CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH FNAFHFKKELDKNLVNSLNAIIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIII HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHH KLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHHMPKDYKNSVYEFIKILIPIG HHHHCCCCCEEEEEEECCCCHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RIVKIIDKEQIEIKSTRTKQFYKVDHFF HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSI CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH FNAFHFKKELDKNLVNSLNAIIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIII HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHH KLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHHMPKDYKNSVYEFIKILIPIG HHHHCCCCCEEEEEEECCCCHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RIVKIIDKEQIEIKSTRTKQFYKVDHFF HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA