| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621580
Identifier: 117621580
GI number: 117621580
Start: 7788
End: 8123
Strand: Direct
Name: 117621580
Synonym: BAPKO_2009
Alternate gene names: NA
Gene position: 7788-8123 (Clockwise)
Preceding gene: 117621575
Following gene: 117621581
Centisome position: 12.99
GC content: 23.21
Gene sequence:
>336_bases ATGGATATTAAAATTGACGAAAAATTTAATATAGTATTTAATAATGACTTTAAATTAATAGAAAACATTGAAGAACAAAA ACAGCGTTTATTCTTCTACCTTAAGACACCAAAAGGCAGCTTAAAAGAAAATCCAAATTATGGGTTTGACTACAGCTTTT ACTTTAAGCTTTGCAAAGCTAATAAGCTAGAATCTATTAAAAATTTTTTTTTAAACCTTTCAAAAGAACTTAAAATAGAT CTTATTAATGTAAAGCCAAGTATTAAAAACAAAACAATAACAATAAAATTTTTCTTTCTGGGAAAAGACACTTTAAAAAT GGATTTTAAAATATGA
Upstream 100 bases:
>100_bases ATAAATTATAATATATCTCAACATTTAAAATAATAAACATTTTGTAAAACTTTATAGTAATATCGAATAAAATATGTTAA AATGACTTTGGTAGTTAAAA
Downstream 100 bases:
>100_bases GTATAATTTTTGATAAAAACTTAGGAATATTAGAAAAAACAATAGAAGAAATTCAAAATGAAAAAAAACATATCCTAAGA ACAAAATACGGCATAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDIKIDEKFNIVFNNDFKLIENIEEQKQRLFFYLKTPKGSLKENPNYGFDYSFYFKLCKANKLESIKNFFLNLSKELKID LINVKPSIKNKTITIKFFFLGKDTLKMDFKI
Sequences:
>Translated_111_residues MDIKIDEKFNIVFNNDFKLIENIEEQKQRLFFYLKTPKGSLKENPNYGFDYSFYFKLCKANKLESIKNFFLNLSKELKID LINVKPSIKNKTITIKFFFLGKDTLKMDFKI >Mature_111_residues MDIKIDEKFNIVFNNDFKLIENIEEQKQRLFFYLKTPKGSLKENPNYGFDYSFYFKLCKANKLESIKNFFLNLSKELKID LINVKPSIKNKTITIKFFFLGKDTLKMDFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13325; Mature: 13325
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKIDEKFNIVFNNDFKLIENIEEQKQRLFFYLKTPKGSLKENPNYGFDYSFYFKLCKA CCEEECCEEEEEECCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHEEEECCC NKLESIKNFFLNLSKELKIDLINVKPSIKNKTITIKFFFLGKDTLKMDFKI CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEEC >Mature Secondary Structure MDIKIDEKFNIVFNNDFKLIENIEEQKQRLFFYLKTPKGSLKENPNYGFDYSFYFKLCKA CCEEECCEEEEEECCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHEEEECCC NKLESIKNFFLNLSKELKIDLINVKPSIKNKTITIKFFFLGKDTLKMDFKI CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA