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The map label for this gene is 117621575

Identifier: 117621575

GI number: 117621575

Start: 3949

End: 4467

Strand: Direct

Name: 117621575

Synonym: BAPKO_2004

Alternate gene names: NA

Gene position: 3949-4467 (Clockwise)

Preceding gene: 117621574

Following gene: 117621580

Centisome position: 6.59

GC content: 26.97

Gene sequence:

>519_bases
TTGAAAAAAACGATTATTATATTTGCCATATTGGCATTTCTGTTTAATTGTACAAACAAAGATAATGATACCAAGCTAAA
TAATGGTGCGGAGGAAGACTCTCAAACACTACAATCTAAATCAGATTTAGTTGATGAAGATAGAATTGAATTTAGCAAAA
CAACACCTTTAGAAAAGTTAATAAGCAAATTAAATTTAAATTCTACTGAAAAAGAAACACTAACATTTTTGACAAACTTA
TTAAAAGAAAAACTATTAGATCCAAATGCTGGTTCAAATTTTAAAAATACCGGTGGGGATGAGAGCAAAATAGAAGAGGC
TATACATCAATTTCTATCAGATCTGAAAGAAGATGAAATAAAAGAAATGCTTGCAAAAATTAAAGAAAATAAAGACAAAA
AAGAAGAAAATTCTGAAGAGTTAAATACTTATAAAACCATACTTGCTAGTGGATTCGATGGAATTTTTAATAAAGCAGAT
TCAAAAACTGTATTAAATAATCTTAAAGACGCTGTATAA

Upstream 100 bases:

>100_bases
ATTATATTATTAATATAATTAATAATATAATTATTAATTATATTAATAATTATATTATTAATTATATTAATAATTAAAAC
TACTTTTAAAGGAGACTATT

Downstream 100 bases:

>100_bases
TGCTAAACTAAGCCTAAAATTTGAAATTACTTTAAAAAAAGCTAGCAGTTAAAACTGCTAGCTCTTAAAACAACTTTCTA
GTTAATCAACGAATTAAATG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKTIIIFAILAFLFNCTNKDNDTKLNNGAEEDSQTLQSKSDLVDEDRIEFSKTTPLEKLISKLNLNSTEKETLTFLTNL
LKEKLLDPNAGSNFKNTGGDESKIEEAIHQFLSDLKEDEIKEMLAKIKENKDKKEENSEELNTYKTILASGFDGIFNKAD
SKTVLNNLKDAV

Sequences:

>Translated_172_residues
MKKTIIIFAILAFLFNCTNKDNDTKLNNGAEEDSQTLQSKSDLVDEDRIEFSKTTPLEKLISKLNLNSTEKETLTFLTNL
LKEKLLDPNAGSNFKNTGGDESKIEEAIHQFLSDLKEDEIKEMLAKIKENKDKKEENSEELNTYKTILASGFDGIFNKAD
SKTVLNNLKDAV
>Mature_172_residues
MKKTIIIFAILAFLFNCTNKDNDTKLNNGAEEDSQTLQSKSDLVDEDRIEFSKTTPLEKLISKLNLNSTEKETLTFLTNL
LKEKLLDPNAGSNFKNTGGDESKIEEAIHQFLSDLKEDEIKEMLAKIKENKDKKEENSEELNTYKTILASGFDGIFNKAD
SKTVLNNLKDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19411; Mature: 19411

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIIIFAILAFLFNCTNKDNDTKLNNGAEEDSQTLQSKSDLVDEDRIEFSKTTPLEKL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH
ISKLNLNSTEKETLTFLTNLLKEKLLDPNAGSNFKNTGGDESKIEEAIHQFLSDLKEDEI
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KEMLAKIKENKDKKEENSEELNTYKTILASGFDGIFNKADSKTVLNNLKDAV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKTIIIFAILAFLFNCTNKDNDTKLNNGAEEDSQTLQSKSDLVDEDRIEFSKTTPLEKL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH
ISKLNLNSTEKETLTFLTNLLKEKLLDPNAGSNFKNTGGDESKIEEAIHQFLSDLKEDEI
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KEMLAKIKENKDKKEENSEELNTYKTILASGFDGIFNKADSKTVLNNLKDAV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]