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The map label for this gene is oppA [H]

Identifier: 116874063

GI number: 116874063

Start: 2679432

End: 2681099

Strand: Direct

Name: oppA [H]

Synonym: lwe2647

Alternate gene names: 116874063

Gene position: 2679432-2681099 (Clockwise)

Preceding gene: 116874062

Following gene: 116874064

Centisome position: 95.21

GC content: 38.01

Gene sequence:

>1668_bases
ATGGTTAAGAAAAATATTGTAATTGCGTTTTTTATTTTGACGTTAGGGCTCGTTCTTGCAGCATGTGGCGGCAATGATAG
TTCTAAAGATAAAGCAACAACTTCTACAGGGGATAAAGGGGATAAAAAAGTTGTTAATTTAATGGAATCCGCTGAAATCC
CATCCATGGATTCTGTTAAAGGAACCGATGGCGTTAGCTTTACAGCACAAAATCAAGTTTTTGAAGGTCTTTACTACTTA
GATAAGGATGATCAAACGCAACCAGGTGTCGCAGCAAGTGACCCAGAAATTTCTGATGACCAAAAAGTATACACGATCAA
ACTACGAGACGATGCAAAATGGTCTAATGGTACAAAAGTAACTGCTCATGATTTCGTTTACGCATGGCAAAAAATTGTTA
ATCCCGCAACCGCAGCAGAATACGCAGTCCTTTTTGATGGGCTGATTGCGAATGCGACAGATATTATTAATGGTAAAAAG
AAACCCGAAGAACTTGGTGTCAAAGCACTTGATGATACTACACTCGAAATCACACTCGAAAATCCAACACCATACTTTCA
TTCTCTTTTAACTTTCCCAACATTCTACCCACAAAATGAAAAATATTCAGAATCACAAGGCGATGATTATGCCAAAGATA
GCGATCATATGATTTATAATGGTCCATTTGTGATGAAAGATTGGAATAATACTAGCAAAGAATGGAAATACGAGAAAAAC
AAAGATTACTGGGACAAAGATACAGTAAAAGTAGACACAATTAATATGCAAGTTGTTAAAGAACCAGGAACTGCTGTTAA
TTTATATTCTACTGGCAAGTTAGACCGCGCAACACTTACAGGTGACTACGCAAAACAAAAACAAAACGATAGTGATTACA
CTACCGAAAAAGAAGCTTTTGTTTATTACTTAAAATTCAACCAAAAGCAAGCTGGAAAATCCACTCTTTTTGCGAATGAA
AATGCACGTAAAGCATTCGCGCTGTCCGTGGATAAAGAATCCTTAGTAAAAACAGTCATGGGTAACGGCTCTACTGCAAT
GAATGGTTTTGTTCCTGCCGAATTTACTTTCAATCCCGAAACAAAAGAAGATTTCCGGAAAGAAAATGGTGACTTATTAA
CAACCGACAAAGCAGCAGCCAAAGAATACTGGAAAAAAGCGAAAGAAGAGCTAGGAATCGATACACTCACTGTAGAACTG
CTTGGCGATGATCAAGACTTCAACAAAAAATCTACAGAGTTCTTACAAAGTGCACTTGAATCAAACTTAGATGGACTAAC
AATTAAAATCAAAACCGTTCCTTACAAAGCTCGCCTAAAATTAGACGAGACAGAAGATTATACATTAGAACTAACTCGTT
GGGGCCCGGACTACCAAGATCCTATCACATTCCTATCGACAACGATGACAGACAACAACTACAACCGCTCTAACTACTCT
AATAAAGAATATGATAAACTGCTAACCGATGCTTCTACCACTTATGCAACACAACCAGAAAAACGCTGGCAAGCAATGCT
TGATGCAGAGAAAATACTAATGGATGATGTTGGTATTGCACCACTTTATCAAGCAGGTACAGCAGCTCTCCAAAGCCCTA
AAGTAACCGGCATTTCTCATCACTTATTCGGCGCTCCATTCAGTTACCACTGGATAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
TTATTAATTATTTCAATTGAAAGAATTAACTAAAAACTCTTTATTTTTCTTAATATTTAGTATAAACTAAATTATGTACC
AAAAAATAGGGAGGTTTACT

Downstream 100 bases:

>100_bases
AATTAAAAAGACGAGCAGTGTGAATTCCCCCCTGAAAAGTTAGACCTAAAAATCTAACTTTTCGGGGGTTTTTTAATGCG
AAAATGCTGTACTTAATTTA

Product: oligopeptide ABC transporter, oligopeptide- binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MVKKNIVIAFFILTLGLVLAACGGNDSSKDKATTSTGDKGDKKVVNLMESAEIPSMDSVKGTDGVSFTAQNQVFEGLYYL
DKDDQTQPGVAASDPEISDDQKVYTIKLRDDAKWSNGTKVTAHDFVYAWQKIVNPATAAEYAVLFDGLIANATDIINGKK
KPEELGVKALDDTTLEITLENPTPYFHSLLTFPTFYPQNEKYSESQGDDYAKDSDHMIYNGPFVMKDWNNTSKEWKYEKN
KDYWDKDTVKVDTINMQVVKEPGTAVNLYSTGKLDRATLTGDYAKQKQNDSDYTTEKEAFVYYLKFNQKQAGKSTLFANE
NARKAFALSVDKESLVKTVMGNGSTAMNGFVPAEFTFNPETKEDFRKENGDLLTTDKAAAKEYWKKAKEELGIDTLTVEL
LGDDQDFNKKSTEFLQSALESNLDGLTIKIKTVPYKARLKLDETEDYTLELTRWGPDYQDPITFLSTTMTDNNYNRSNYS
NKEYDKLLTDASTTYATQPEKRWQAMLDAEKILMDDVGIAPLYQAGTAALQSPKVTGISHHLFGAPFSYHWIEKK

Sequences:

>Translated_555_residues
MVKKNIVIAFFILTLGLVLAACGGNDSSKDKATTSTGDKGDKKVVNLMESAEIPSMDSVKGTDGVSFTAQNQVFEGLYYL
DKDDQTQPGVAASDPEISDDQKVYTIKLRDDAKWSNGTKVTAHDFVYAWQKIVNPATAAEYAVLFDGLIANATDIINGKK
KPEELGVKALDDTTLEITLENPTPYFHSLLTFPTFYPQNEKYSESQGDDYAKDSDHMIYNGPFVMKDWNNTSKEWKYEKN
KDYWDKDTVKVDTINMQVVKEPGTAVNLYSTGKLDRATLTGDYAKQKQNDSDYTTEKEAFVYYLKFNQKQAGKSTLFANE
NARKAFALSVDKESLVKTVMGNGSTAMNGFVPAEFTFNPETKEDFRKENGDLLTTDKAAAKEYWKKAKEELGIDTLTVEL
LGDDQDFNKKSTEFLQSALESNLDGLTIKIKTVPYKARLKLDETEDYTLELTRWGPDYQDPITFLSTTMTDNNYNRSNYS
NKEYDKLLTDASTTYATQPEKRWQAMLDAEKILMDDVGIAPLYQAGTAALQSPKVTGISHHLFGAPFSYHWIEKK
>Mature_555_residues
MVKKNIVIAFFILTLGLVLAACGGNDSSKDKATTSTGDKGDKKVVNLMESAEIPSMDSVKGTDGVSFTAQNQVFEGLYYL
DKDDQTQPGVAASDPEISDDQKVYTIKLRDDAKWSNGTKVTAHDFVYAWQKIVNPATAAEYAVLFDGLIANATDIINGKK
KPEELGVKALDDTTLEITLENPTPYFHSLLTFPTFYPQNEKYSESQGDDYAKDSDHMIYNGPFVMKDWNNTSKEWKYEKN
KDYWDKDTVKVDTINMQVVKEPGTAVNLYSTGKLDRATLTGDYAKQKQNDSDYTTEKEAFVYYLKFNQKQAGKSTLFANE
NARKAFALSVDKESLVKTVMGNGSTAMNGFVPAEFTFNPETKEDFRKENGDLLTTDKAAAKEYWKKAKEELGIDTLTVEL
LGDDQDFNKKSTEFLQSALESNLDGLTIKIKTVPYKARLKLDETEDYTLELTRWGPDYQDPITFLSTTMTDNNYNRSNYS
NKEYDKLLTDASTTYATQPEKRWQAMLDAEKILMDDVGIAPLYQAGTAALQSPKVTGISHHLFGAPFSYHWIEKK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=539, Percent_Identity=28.9424860853432, Blast_Score=192, Evalue=7e-50,
Organism=Escherichia coli, GI1789397, Length=472, Percent_Identity=30.0847457627119, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI87081878, Length=497, Percent_Identity=29.7786720321932, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1787762, Length=471, Percent_Identity=24.6284501061571, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787052, Length=505, Percent_Identity=22.1782178217822, Blast_Score=76, Evalue=7e-15,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62335; Mature: 62335

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKNIVIAFFILTLGLVLAACGGNDSSKDKATTSTGDKGDKKVVNLMESAEIPSMDSVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GTDGVSFTAQNQVFEGLYYLDKDDQTQPGVAASDPEISDDQKVYTIKLRDDAKWSNGTKV
CCCCCEEEEHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEE
TAHDFVYAWQKIVNPATAAEYAVLFDGLIANATDIINGKKKPEELGVKALDDTTLEITLE
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCCEEECCCEEEEEEC
NPTPYFHSLLTFPTFYPQNEKYSESQGDDYAKDSDHMIYNGPFVMKDWNNTSKEWKYEKN
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCC
KDYWDKDTVKVDTINMQVVKEPGTAVNLYSTGKLDRATLTGDYAKQKQNDSDYTTEKEAF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEECCHHHHHCCCCCCCCCCCCEE
VYYLKFNQKQAGKSTLFANENARKAFALSVDKESLVKTVMGNGSTAMNGFVPAEFTFNPE
EEEEEECCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCC
TKEDFRKENGDLLTTDKAAAKEYWKKAKEELGIDTLTVELLGDDQDFNKKSTEFLQSALE
CHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
SNLDGLTIKIKTVPYKARLKLDETEDYTLELTRWGPDYQDPITFLSTTMTDNNYNRSNYS
CCCCCEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCHHEEEEEECCCCCCCCCCC
NKEYDKLLTDASTTYATQPEKRWQAMLDAEKILMDDVGIAPLYQAGTAALQSPKVTGISH
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHCCCCCCCCCH
HLFGAPFSYHWIEKK
HHCCCCCEEEEECCC
>Mature Secondary Structure
MVKKNIVIAFFILTLGLVLAACGGNDSSKDKATTSTGDKGDKKVVNLMESAEIPSMDSVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GTDGVSFTAQNQVFEGLYYLDKDDQTQPGVAASDPEISDDQKVYTIKLRDDAKWSNGTKV
CCCCCEEEEHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEE
TAHDFVYAWQKIVNPATAAEYAVLFDGLIANATDIINGKKKPEELGVKALDDTTLEITLE
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCCEEECCCEEEEEEC
NPTPYFHSLLTFPTFYPQNEKYSESQGDDYAKDSDHMIYNGPFVMKDWNNTSKEWKYEKN
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCC
KDYWDKDTVKVDTINMQVVKEPGTAVNLYSTGKLDRATLTGDYAKQKQNDSDYTTEKEAF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEECCHHHHHCCCCCCCCCCCCEE
VYYLKFNQKQAGKSTLFANENARKAFALSVDKESLVKTVMGNGSTAMNGFVPAEFTFNPE
EEEEEECCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCC
TKEDFRKENGDLLTTDKAAAKEYWKKAKEELGIDTLTVELLGDDQDFNKKSTEFLQSALE
CHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
SNLDGLTIKIKTVPYKARLKLDETEDYTLELTRWGPDYQDPITFLSTTMTDNNYNRSNYS
CCCCCEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCHHEEEEEECCCCCCCCCCC
NKEYDKLLTDASTTYATQPEKRWQAMLDAEKILMDDVGIAPLYQAGTAALQSPKVTGISH
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHCCCCCCCCCH
HLFGAPFSYHWIEKK
HHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]