| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873969
Identifier: 116873969
GI number: 116873969
Start: 2595289
End: 2596188
Strand: Direct
Name: 116873969
Synonym: lwe2553
Alternate gene names: NA
Gene position: 2595289-2596188 (Clockwise)
Preceding gene: 116873968
Following gene: 116874004
Centisome position: 92.22
GC content: 36.67
Gene sequence:
>900_bases ATGAAAAAATTTGTAACCTCAGATCGTTCGATTCATAAGATGGATGAATCAACAGAACCTGTGATTACAGTGAAAGACGG CTCCGTTGTGACAATAAAAATAAAAGATCACTTCAACGGCCAAATCAACGAAGAACAGCTTCATTACGGGGAAATAGATT GGAAGCAGTTTTCACCAACCACTGGCCCAATATATGTAGATGGTGCACGGCCAGGAGATTTACTCGCAATAACGATTGAA AAAATCAAACTCACAAGCAAAGACGTCCTCTTATTAAATGGTCCAAACATCGGCATAACCGGTGAATTGTTGCCAAACAA CTGCATCAGACGTTATAAAATCGAACGAAATAAAATTATTTACTCCGAAGAAATCCACATACGTTTGCGAAAAACAATTG GTTTACTAAAAACAGAATCTAATAAGCAAACCACCCCATTTCATATGTCTACTAAATACGGAGGCGCACTTGACTCTTCA GACATCACAGAAGGAGCAACCATATTTTTGCCAGTAGAAAAATACGGGGCAATGCTTCATATTGGTGATGTAAGAGCAAC AACAGGATTTGGAAAAATCACTTCAACTAGTGCAGAAGCTCCAGCAGAAGTAACATTACGCCTGCAAGTATTAAAAAACA AGACAGCTCCCACACCTACGATAATTCATAAAAACAATTTGATTTGCCTCGCCTCAGATCTTACTATAGAAAACTCAACA AAAAAAGCTCTACAAAATATGTTAACACTACTCACTGAATCAGATAAAATAACATTGGAAGATGCGATATTTTTGTTGTC TTTACAAGCCGATTTCGAAGTTTGCCAATTAAGTAAAGCAAACATAAATACGAGTATAAAGTTATCTTTAGACTGCTTTC CAGAAATGCCATTTCTATAA
Upstream 100 bases:
>100_bases ATTTTAAGCCAAATTGTTCACAGAATATCCATTTACTTACATCTTCCCATTTTGCTATAATTCACCCGTCAGCATAAACT GAACAGAAAGAAGGGATGAG
Downstream 100 bases:
>100_bases AAAGAAGCCAGATTGCACTTTGATGCAATCTGGCTTTTTTATACTAATTCAAACAAACTACCTTGATATTCTTTTTCTAG AAAGCACGCCATATTCTTTG
Product: acetamidase/formamidase family protein
Products: NA
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Amidase-Related Protein; Acetamidase/Formamidase Family; Amidae; Transcriptional Regulatory Protein
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKKFVTSDRSIHKMDESTEPVITVKDGSVVTIKIKDHFNGQINEEQLHYGEIDWKQFSPTTGPIYVDGARPGDLLAITIE KIKLTSKDVLLLNGPNIGITGELLPNNCIRRYKIERNKIIYSEEIHIRLRKTIGLLKTESNKQTTPFHMSTKYGGALDSS DITEGATIFLPVEKYGAMLHIGDVRATTGFGKITSTSAEAPAEVTLRLQVLKNKTAPTPTIIHKNNLICLASDLTIENST KKALQNMLTLLTESDKITLEDAIFLLSLQADFEVCQLSKANINTSIKLSLDCFPEMPFL
Sequences:
>Translated_299_residues MKKFVTSDRSIHKMDESTEPVITVKDGSVVTIKIKDHFNGQINEEQLHYGEIDWKQFSPTTGPIYVDGARPGDLLAITIE KIKLTSKDVLLLNGPNIGITGELLPNNCIRRYKIERNKIIYSEEIHIRLRKTIGLLKTESNKQTTPFHMSTKYGGALDSS DITEGATIFLPVEKYGAMLHIGDVRATTGFGKITSTSAEAPAEVTLRLQVLKNKTAPTPTIIHKNNLICLASDLTIENST KKALQNMLTLLTESDKITLEDAIFLLSLQADFEVCQLSKANINTSIKLSLDCFPEMPFL >Mature_299_residues MKKFVTSDRSIHKMDESTEPVITVKDGSVVTIKIKDHFNGQINEEQLHYGEIDWKQFSPTTGPIYVDGARPGDLLAITIE KIKLTSKDVLLLNGPNIGITGELLPNNCIRRYKIERNKIIYSEEIHIRLRKTIGLLKTESNKQTTPFHMSTKYGGALDSS DITEGATIFLPVEKYGAMLHIGDVRATTGFGKITSTSAEAPAEVTLRLQVLKNKTAPTPTIIHKNNLICLASDLTIENST KKALQNMLTLLTESDKITLEDAIFLLSLQADFEVCQLSKANINTSIKLSLDCFPEMPFL
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33219; Mature: 33219
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFVTSDRSIHKMDESTEPVITVKDGSVVTIKIKDHFNGQINEEQLHYGEIDWKQFSPT CCCCCCCCCCHHHCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEECCCCHHCCCCC TGPIYVDGARPGDLLAITIEKIKLTSKDVLLLNGPNIGITGELLPNNCIRRYKIERNKII CCCEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEECCCCCHHHEEECCCEEE YSEEIHIRLRKTIGLLKTESNKQTTPFHMSTKYGGALDSSDITEGATIFLPVEKYGAMLH EECEEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCEEE IGDVRATTGFGKITSTSAEAPAEVTLRLQVLKNKTAPTPTIIHKNNLICLASDLTIENST ECCEEEECCCCCEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCEEEEEECCEECCHH KKALQNMLTLLTESDKITLEDAIFLLSLQADFEVCQLSKANINTSIKLSLDCFPEMPFL HHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKKFVTSDRSIHKMDESTEPVITVKDGSVVTIKIKDHFNGQINEEQLHYGEIDWKQFSPT CCCCCCCCCCHHHCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEECCCCHHCCCCC TGPIYVDGARPGDLLAITIEKIKLTSKDVLLLNGPNIGITGELLPNNCIRRYKIERNKII CCCEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEECCCCCHHHEEECCCEEE YSEEIHIRLRKTIGLLKTESNKQTTPFHMSTKYGGALDSSDITEGATIFLPVEKYGAMLH EECEEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCEEE IGDVRATTGFGKITSTSAEAPAEVTLRLQVLKNKTAPTPTIIHKNNLICLASDLTIENST ECCEEEECCCCCEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCEEEEEECCEECCHH KKALQNMLTLLTESDKITLEDAIFLLSLQADFEVCQLSKANINTSIKLSLDCFPEMPFL HHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA