| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873779
Identifier: 116873779
GI number: 116873779
Start: 2404455
End: 2405531
Strand: Direct
Name: 116873779
Synonym: lwe2363
Alternate gene names: NA
Gene position: 2404455-2405531 (Clockwise)
Preceding gene: 116873773
Following gene: 116873795
Centisome position: 85.44
GC content: 33.24
Gene sequence:
>1077_bases ATGAAGAAAGCAATAATGGCTGTGACCATCTTTGTATTGCTTCTAGCTACTTTATCTGGGTGTAGTTCCCCTAAGTCCGA CTTCACTGCCGCCTTGAAAAAAACTGCTGAAAATCAACAATATACAACTAATGTGAAATTCCAAGTAAACAATCTTTCAG ACAACTATATAAAGAAACTTGGTTCAGATATAAATTTAAATCAACTAAAAAAATCGAACATCCAATATAAAATTTCTGTA GATAATGATTCTTCCACTTCTTATAGTGAATTTTCCCTTCACTGGGCTGATGAACAACCACTTGATTTAACGTTACATGT CCTTCAAAACAGTGATGATGGAAAAGCTTATATCCCTGTATCAGATATCTATGATGCTTCTGATAGCATTTCTAATTTGT TACCCGATGTAGGTGCAAAGATTTTTAACCAAGTGCTCGATCAGAACAAAGATCTAGAGTCCAAGTATTTAAATCTATTC GAAACAATCCAGAACTTTTCCAACCAAGCGATTGACAGCGAAACCGTTGATCGACAAGCTGAAGAGCTGAAAAAAATTGA AGAAGTTAGTGGTATCGCGATTTATGATTATTTAAACGATTTAGATGATAAACATTTTAAAGCAAAAGATAACGGGGACA TTATTCTCACTTTAGGCAAAACGGAAATCAGTGGTCTTGTTAATGAAGTTTTAACAACACTTGATGACAATGGAAATATC ATTACCCTTATTTCAGAAATTGATGGTATTACGCAAAAACAAGCGCAAACAAAATGGAACACACAACAAAAAAATATTCG CTCTTCTTTAAAGAGCCTGACATCAAAAAAAGAACAACGCCTAGATTTTAAACTCACTGTAACACCTGACAATACTAAAG GTTTTAGTAAAGCCATTATTACAACTAATTTTGAAGATACAAAAACAAAAGACTTAATGGAGTTCACAACAACCATTGAT ATGTTAGATTACGAAAAAGTCCCTTCCATGCCAGAAGGAAAAGAAATTGTTTCTAAAAAAGAACTTGATAAAGCTATTTC TGACGGTCTTAAATTATATTTAAGCAGCGCACAGTAA
Upstream 100 bases:
>100_bases TGTATATCTTATTTAGTTATGGTATTGTTGTAACGTAACAAAATTGCAACATAATAACTTTTTTGTAATAAACGATTATT TTTTGAAGGAGAATATTAAT
Downstream 100 bases:
>100_bases TAAAAAACCCCTTTTACCGAAATGGTAAAAGGGGTTTTGATGTTTATTTATCAACTGGAACAACTGCGCCGTCCCATTCT TTCGTAATATAATCTTGAAT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKKAIMAVTIFVLLLATLSGCSSPKSDFTAALKKTAENQQYTTNVKFQVNNLSDNYIKKLGSDINLNQLKKSNIQYKISV DNDSSTSYSEFSLHWADEQPLDLTLHVLQNSDDGKAYIPVSDIYDASDSISNLLPDVGAKIFNQVLDQNKDLESKYLNLF ETIQNFSNQAIDSETVDRQAEELKKIEEVSGIAIYDYLNDLDDKHFKAKDNGDIILTLGKTEISGLVNEVLTTLDDNGNI ITLISEIDGITQKQAQTKWNTQQKNIRSSLKSLTSKKEQRLDFKLTVTPDNTKGFSKAIITTNFEDTKTKDLMEFTTTID MLDYEKVPSMPEGKEIVSKKELDKAISDGLKLYLSSAQ
Sequences:
>Translated_358_residues MKKAIMAVTIFVLLLATLSGCSSPKSDFTAALKKTAENQQYTTNVKFQVNNLSDNYIKKLGSDINLNQLKKSNIQYKISV DNDSSTSYSEFSLHWADEQPLDLTLHVLQNSDDGKAYIPVSDIYDASDSISNLLPDVGAKIFNQVLDQNKDLESKYLNLF ETIQNFSNQAIDSETVDRQAEELKKIEEVSGIAIYDYLNDLDDKHFKAKDNGDIILTLGKTEISGLVNEVLTTLDDNGNI ITLISEIDGITQKQAQTKWNTQQKNIRSSLKSLTSKKEQRLDFKLTVTPDNTKGFSKAIITTNFEDTKTKDLMEFTTTID MLDYEKVPSMPEGKEIVSKKELDKAISDGLKLYLSSAQ >Mature_358_residues MKKAIMAVTIFVLLLATLSGCSSPKSDFTAALKKTAENQQYTTNVKFQVNNLSDNYIKKLGSDINLNQLKKSNIQYKISV DNDSSTSYSEFSLHWADEQPLDLTLHVLQNSDDGKAYIPVSDIYDASDSISNLLPDVGAKIFNQVLDQNKDLESKYLNLF ETIQNFSNQAIDSETVDRQAEELKKIEEVSGIAIYDYLNDLDDKHFKAKDNGDIILTLGKTEISGLVNEVLTTLDDNGNI ITLISEIDGITQKQAQTKWNTQQKNIRSSLKSLTSKKEQRLDFKLTVTPDNTKGFSKAIITTNFEDTKTKDLMEFTTTID MLDYEKVPSMPEGKEIVSKKELDKAISDGLKLYLSSAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40119; Mature: 40119
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAIMAVTIFVLLLATLSGCSSPKSDFTAALKKTAENQQYTTNVKFQVNNLSDNYIKKL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHC GSDINLNQLKKSNIQYKISVDNDSSTSYSEFSLHWADEQPLDLTLHVLQNSDDGKAYIPV CCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEH SDIYDASDSISNLLPDVGAKIFNQVLDQNKDLESKYLNLFETIQNFSNQAIDSETVDRQA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EELKKIEEVSGIAIYDYLNDLDDKHFKAKDNGDIILTLGKTEISGLVNEVLTTLDDNGNI HHHHHHHHHCCEEHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCE ITLISEIDGITQKQAQTKWNTQQKNIRSSLKSLTSKKEQRLDFKLTVTPDNTKGFSKAII EEEEHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE TTNFEDTKTKDLMEFTTTIDMLDYEKVPSMPEGKEIVSKKELDKAISDGLKLYLSSAQ EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKAIMAVTIFVLLLATLSGCSSPKSDFTAALKKTAENQQYTTNVKFQVNNLSDNYIKKL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHC GSDINLNQLKKSNIQYKISVDNDSSTSYSEFSLHWADEQPLDLTLHVLQNSDDGKAYIPV CCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEH SDIYDASDSISNLLPDVGAKIFNQVLDQNKDLESKYLNLFETIQNFSNQAIDSETVDRQA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EELKKIEEVSGIAIYDYLNDLDDKHFKAKDNGDIILTLGKTEISGLVNEVLTTLDDNGNI HHHHHHHHHCCEEHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCE ITLISEIDGITQKQAQTKWNTQQKNIRSSLKSLTSKKEQRLDFKLTVTPDNTKGFSKAII EEEEHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE TTNFEDTKTKDLMEFTTTIDMLDYEKVPSMPEGKEIVSKKELDKAISDGLKLYLSSAQ EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA