| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873767
Identifier: 116873767
GI number: 116873767
Start: 2394555
End: 2395394
Strand: Direct
Name: 116873767
Synonym: lwe2351
Alternate gene names: NA
Gene position: 2394555-2395394 (Clockwise)
Preceding gene: 116873761
Following gene: 116873768
Centisome position: 85.09
GC content: 42.74
Gene sequence:
>840_bases TTGGATATTACGCAAACAGTCGAAATTCTTTTAATCTCTGTTTTTGCAGGGGTTGTAGGCTCTTTGCTCGGGCTTGGTGG TGGAATAATTGTTACTCCAGCCTTGACACTTATTTTCGGGATTGATATCCAGTACGCGATTGGAGCTAGTATTATTTCCG TTATCGCAACTAGTAGCGGCTCTGCAATCGCTTATATCAAAGATGGCATTACAAACCTCCGTGTTGGAATGTTTCTCGAA ATTGCAACTACAATCGGGGCAATAACCGGGGCTTTTGTCAGTGGACTGCTCTCGGCCACAGCTCTCTACATCATCTTCGG ACTTTTACTTCTTTATTCAGCTTTTAACATGATCAAAAAAGTCGGTTCAGAATTCCCGACCAATGTGAAACCTGACCCAC TCGCAACAAAATTAAACTTACATGATTCTTATTATGATAAATCTTTACGCCAGACAGTTGATTATCAAGTTGCAAACGTT CCTGCTGGTTTCGGCGTAATGTATGGTGCAGGTATTGCTAGTGGCTTGCTTGGAATCGGTAGTGGCGCATTTAAAGTCAT GGCACTTGATGTCTTTATGAAAATGCCGCTAAAAGTTAGTAGCGCTACGAGTAATTTAATGATGGGCGTAACCGCGGCTG CCAGTGCGACTGTTTATCTGTTCCAAGGTGACATTCAGCCCGCTATTGCAGCACCAGTTGCTATTGGGGTACTTGTCGGC GCAACACTTGGAACGCGCATCATGCAACGCCTAAAAAGCAAAGTCATTCGGATTATTTTTATTCCCGTCATTTTATATGT TGCATTCCAAATGATTTTAGAAGGATTGGGGTGGATTTAA
Upstream 100 bases:
>100_bases CTCAAAATAGTTTTTTTTACACGCACTAGGACTGGATGAATTCTTCCCTGTTCATTTTGTGTTATGATAGGATATATTGT TTTAAAGGGAAGTGATTTTT
Downstream 100 bases:
>100_bases ATGGCAGAGAAAAAAGAAGAAATGTACCGTGTGGAGTTGATTGTTAGCGCACTGCTACGAATCGGTGTTGTTCTCAGTGC GATTATTATCATTTTTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLE IATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAIAAPVAIGVLVG ATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGLGWI
Sequences:
>Translated_279_residues MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLE IATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAIAAPVAIGVLVG ATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGLGWI >Mature_279_residues MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLE IATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAIAAPVAIGVLVG ATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGLGWI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29137; Mature: 29137
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQYAIGASIISVIATSSG CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC SAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKK CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIG HHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC SGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAIAAPVAIGVLVG CCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHH ATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGLGWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQYAIGASIISVIATSSG CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC SAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKK CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIG HHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC SGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAIAAPVAIGVLVG CCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHH ATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGLGWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA