| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is inlJ [H]
Identifier: 116873759
GI number: 116873759
Start: 2386251
End: 2389085
Strand: Direct
Name: inlJ [H]
Synonym: lwe2343
Alternate gene names: 116873759
Gene position: 2386251-2389085 (Clockwise)
Preceding gene: 116873755
Following gene: 116873760
Centisome position: 84.8
GC content: 37.07
Gene sequence:
>2835_bases ATGCACAAAATAATGAAAACAATTTTAGCTTTATTATTAATGACAACTGTATTTTTACCATTTAGTAGCGTACAAGCTGC TCCAACAGATGTAGTAAATATACCCGACCCTTATTTAAAGGAAGGATTAAAAAATATTGTAGGAAATCCTTTCTTAGATG ACTTAACTGAAGCTGACATGGCGACCATAAATGTTGCAGACATCTCTTACATGTCCGGATCACCTGGATATCCAGTTAAA GGTCTAATTAAAGATTTAACAGGACTAGATAAAGCTGTTAATATGACTAAATTACATTTTTCCAACCAATCACAAATCAA AAATTTAGATCAAATCAAAAATTTGCCCAATTTAAAGAAAATTGTTGGTGTAACTACTGGATTAAATAATATTTCGGCTC TTAGAGACATGCCTGCATTAGAAGAAGTAGAACTAGGTGGAGACTATATTACTGATTTTACACCATTACTTGAAAAAGAA AATTTAACATCATTTTCTTACAATTCGTATGCATGGTCCAATCCCGCATACCATAAAATCAATAATGATGAATTCAAAAA ATTTGCCAATCTAAAATCATTAGTAGATTTAAATTTGACTTGGAATAACATTACCGATTTATCTCCATTGACAGAAAATG ATCATATTACCAACTTAAATTTAAACTATAATCAGTTCAATAATGTGGCTCCTATCGCTACTATGAAAAACCTGCAAGTA CTTTATTTAAATAACAACAACTTAACTTCTATTGATTCACTGAGCACACTAAGAGGTTTAACAATTGCTTACGCGGATAA TAATAAAATTACCGATTTAAGTAATTTGAAAGACTTCTTTGAGGGAATGCTTACACAAGGTGATTATCAAGGATTACAAA TTAACAACCAAACCATCACTCTACCAACCCTTAATATTAAACAAGGAGCGACTGCTGTTTCAACCAATCCTACTTTAGAT ATTAATGGTCAACAAATGCCTGTTTCTAATATTTCTAATGGCGGAACAGTATCTGCTGATAACAAAACAGTTTCTTTTGC AAACTTACCATTAGGAAATAACACAGTCACTTACAAAGCAACATTTACAGCAACCTCTTCTAAAGGGGTGCCACTTAGCT ACTCTATAAACGTATCACAACCAATTAATGTTTCTGAGCAATCAGATTCTACCATAAACGTGTTTTACCAAGATGAAAAT GGTAATGAATTAGCAACAACCGAAACTCTTTCAGGTAAACCAGGTGAAGATTACCAAACGACAGAAAAAACAATTACCAA CTATCAATTAAAAGAAATCGAAGGACAACCTTCTGGCAAATTTAGCGATACCGATGCAACTGTCACTTATGTATACGAAA AAGCGGACGGCGCTCCTGTTACTGTTAAATACACAGATGACAAAGGAAACGAGCTCGCTACTCCTGATACTTTAAACGGT AAGTTAGATGCTCCTTATCAAACTACTGCCAAAAACATCGCTGGCTGGACTGTCAAAACAACACCTAGTAACGCAAATGG CGTGTTCACGAATACTAACCAAACTGTCACGTATGTATACGAAAAAGCGGACGCCGCTCCGGTTACTGTTAAATACACAG ATGACCAAGGCAATGAGCTCGCTACTCCCGACACTTTAAATGGTAAGTTAGATGCTCCTTATCAAGCCACTGCCAAAAAC ATCACTGGCTGGACTGTCAAAACTACACCTAGTAACGCAACTGGCGTGTTCACGAATACTAACCAAACTGTTACGTATGT ATACGAAAAAGCGGACGCCGCTCCGGTTACTGTTAAATACACAGATGACAAAGGAAACGAGCTCGCTACTCCTGATACTT TAAACGGCAAGTTAGACGCTCCTTATCAAACTACTGCCAAAAACATTGCTGGCTGGGCTGTCAAAACTACACCTAGTAAC GTAACTGGCGTATTCACAAATACCAACCAAATTGTTACGTATGTATACGAAAAAGCGGACGGCGCTCCGGTTACTGTTAA ATACACAGATGACAAAGGAAACGAGCTCGCTACTCCTGATACTTTAAACGGCAAGTTAGACGCTCCTTATCAAACCACTG CCAAAAACATCACTGGCTGGACTGTCAAAACTACACCTAGTAACGCAACTGGCGTATTCACGAATACTAACCAAACTGTC ACGTATGTATACGAAAAAGCGGACGCCGCTCCGGTTACTGTTAAATACACAGATGACCAAGGCAATGAGCTCGCTACTCC CGACACTTTAAACGGCAAGTTAGATGCCCCTTATCAAACTACTGCAAAAAACATCACTGGCTGGACTGTCAAAACTACAC CTAGTAACGCAACTGGCGTGTTCACGAATACCAACCAAACTGTCACTTATGTATACGAAAAAGCGGACGCCGCTCCTGTT ACTGTCAAATACACAGATGATAAAGGAAACGAGCTCGCTACTCCCGACACTTTAAACGGCAAGTTAGATGCTCCCTATCA AGCCACTGCCAAAAATCTAAGTGGTTGGAAGTTAAAAACTATGCCTTCAAATGCAAAAGGCGTATTTACTAGTGAGTCGC AAACTGTCAACTTTGTATATGTTAAACAAACAGATGATACTAAAAAAGATGATCCAAAATCGAACAACCCTAAACCAAAC AATCCAAAACCAGATAAAAATAAACCAGCAATCAAAATCAACGAGAATAATCCTAAAGCAAAACAAACAACTATAACAAA ACAAGCAAAATTACCAAAAACAGGTGATAATAAACAAAATAATATTTTGTTCGGAGTAATTGGTACATGTTTTGTTCTTT TAGGCGCATTCGCATTAACGAAAAAAACTAGCTAA
Upstream 100 bases:
>100_bases TACAATTACACTGCTTTGAGATTCTATGAAGGACAAAATATGACTTCACCGGAATCTTGAAGAAAAGAACATGTGTAATA ACAAGGAGGAAATCAGAACC
Downstream 100 bases:
>100_bases AATAGCATCTAACCCCCTCTCGTCGTTCAGATAAGAGGGGGTTTTTATTATAATCATTTTTAAATATACGTTCCTTTTCC GACGAAGGAACCCAATTTAA
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 944; Mature: 944
Protein sequence:
>944_residues MHKIMKTILALLLMTTVFLPFSSVQAAPTDVVNIPDPYLKEGLKNIVGNPFLDDLTEADMATINVADISYMSGSPGYPVK GLIKDLTGLDKAVNMTKLHFSNQSQIKNLDQIKNLPNLKKIVGVTTGLNNISALRDMPALEEVELGGDYITDFTPLLEKE NLTSFSYNSYAWSNPAYHKINNDEFKKFANLKSLVDLNLTWNNITDLSPLTENDHITNLNLNYNQFNNVAPIATMKNLQV LYLNNNNLTSIDSLSTLRGLTIAYADNNKITDLSNLKDFFEGMLTQGDYQGLQINNQTITLPTLNIKQGATAVSTNPTLD INGQQMPVSNISNGGTVSADNKTVSFANLPLGNNTVTYKATFTATSSKGVPLSYSINVSQPINVSEQSDSTINVFYQDEN GNELATTETLSGKPGEDYQTTEKTITNYQLKEIEGQPSGKFSDTDATVTYVYEKADGAPVTVKYTDDKGNELATPDTLNG KLDAPYQTTAKNIAGWTVKTTPSNANGVFTNTNQTVTYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQATAKN ITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNIAGWAVKTTPSN VTGVFTNTNQIVTYVYEKADGAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTV TYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPV TVKYTDDKGNELATPDTLNGKLDAPYQATAKNLSGWKLKTMPSNAKGVFTSESQTVNFVYVKQTDDTKKDDPKSNNPKPN NPKPDKNKPAIKINENNPKAKQTTITKQAKLPKTGDNKQNNILFGVIGTCFVLLGAFALTKKTS
Sequences:
>Translated_944_residues MHKIMKTILALLLMTTVFLPFSSVQAAPTDVVNIPDPYLKEGLKNIVGNPFLDDLTEADMATINVADISYMSGSPGYPVK GLIKDLTGLDKAVNMTKLHFSNQSQIKNLDQIKNLPNLKKIVGVTTGLNNISALRDMPALEEVELGGDYITDFTPLLEKE NLTSFSYNSYAWSNPAYHKINNDEFKKFANLKSLVDLNLTWNNITDLSPLTENDHITNLNLNYNQFNNVAPIATMKNLQV LYLNNNNLTSIDSLSTLRGLTIAYADNNKITDLSNLKDFFEGMLTQGDYQGLQINNQTITLPTLNIKQGATAVSTNPTLD INGQQMPVSNISNGGTVSADNKTVSFANLPLGNNTVTYKATFTATSSKGVPLSYSINVSQPINVSEQSDSTINVFYQDEN GNELATTETLSGKPGEDYQTTEKTITNYQLKEIEGQPSGKFSDTDATVTYVYEKADGAPVTVKYTDDKGNELATPDTLNG KLDAPYQTTAKNIAGWTVKTTPSNANGVFTNTNQTVTYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQATAKN ITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNIAGWAVKTTPSN VTGVFTNTNQIVTYVYEKADGAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTV TYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPV TVKYTDDKGNELATPDTLNGKLDAPYQATAKNLSGWKLKTMPSNAKGVFTSESQTVNFVYVKQTDDTKKDDPKSNNPKPN NPKPDKNKPAIKINENNPKAKQTTITKQAKLPKTGDNKQNNILFGVIGTCFVLLGAFALTKKTS >Mature_944_residues MHKIMKTILALLLMTTVFLPFSSVQAAPTDVVNIPDPYLKEGLKNIVGNPFLDDLTEADMATINVADISYMSGSPGYPVK GLIKDLTGLDKAVNMTKLHFSNQSQIKNLDQIKNLPNLKKIVGVTTGLNNISALRDMPALEEVELGGDYITDFTPLLEKE NLTSFSYNSYAWSNPAYHKINNDEFKKFANLKSLVDLNLTWNNITDLSPLTENDHITNLNLNYNQFNNVAPIATMKNLQV LYLNNNNLTSIDSLSTLRGLTIAYADNNKITDLSNLKDFFEGMLTQGDYQGLQINNQTITLPTLNIKQGATAVSTNPTLD INGQQMPVSNISNGGTVSADNKTVSFANLPLGNNTVTYKATFTATSSKGVPLSYSINVSQPINVSEQSDSTINVFYQDEN GNELATTETLSGKPGEDYQTTEKTITNYQLKEIEGQPSGKFSDTDATVTYVYEKADGAPVTVKYTDDKGNELATPDTLNG KLDAPYQTTAKNIAGWTVKTTPSNANGVFTNTNQTVTYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQATAKN ITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNIAGWAVKTTPSN VTGVFTNTNQIVTYVYEKADGAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTV TYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPV TVKYTDDKGNELATPDTLNGKLDAPYQATAKNLSGWKLKTMPSNAKGVFTSESQTVNFVYVKQTDDTKKDDPKSNNPKPN NPKPDKNKPAIKINENNPKAKQTTITKQAKLPKTGDNKQNNILFGVIGTCFVLLGAFALTKKTS
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 102512; Mature: 102512
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIMKTILALLLMTTVFLPFSSVQAAPTDVVNIPDPYLKEGLKNIVGNPFLDDLTEADM CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCCE ATINVADISYMSGSPGYPVKGLIKDLTGLDKAVNMTKLHFSNQSQIKNLDQIKNLPNLKK EEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCHHH IVGVTTGLNNISALRDMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSNPAYHKI HHEEECCCCHHHHHHCCCCHHEEECCCCCCCCCHHHHCCCCCCEEECCCEECCCCCEECC NNDEFKKFANLKSLVDLNLTWNNITDLSPLTENDHITNLNLNYNQFNNVAPIATMKNLQV CCHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEECCEEE LYLNNNNLTSIDSLSTLRGLTIAYADNNKITDLSNLKDFFEGMLTQGDYQGLQINNQTIT EEECCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCEEE LPTLNIKQGATAVSTNPTLDINGQQMPVSNISNGGTVSADNKTVSFANLPLGNNTVTYKA EEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEE TFTATSSKGVPLSYSINVSQPINVSEQSDSTINVFYQDENGNELATTETLSGKPGEDYQT EEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCH TEKTITNYQLKEIEGQPSGKFSDTDATVTYVYEKADGAPVTVKYTDDKGNELATPDTLNG HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC KLDAPYQTTAKNIAGWTVKTTPSNANGVFTNTNQTVTYVYEKADAAPVTVKYTDDQGNEL CCCCCHHHHHHCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCC ATPDTLNGKLDAPYQATAKNITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPVTVKY CCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE TDDKGNELATPDTLNGKLDAPYQTTAKNIAGWAVKTTPSNVTGVFTNTNQIVTYVYEKAD ECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEEEECCC GAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTV CCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCEEEECCCCEE TYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGV EEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCEE FTNTNQTVTYVYEKADAAPVTVKYTDDKGNELATPDTLNGKLDAPYQATAKNLSGWKLKT EECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE MPSNAKGVFTSESQTVNFVYVKQTDDTKKDDPKSNNPKPNNPKPDKNKPAIKINENNPKA CCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC KQTTITKQAKLPKTGDNKQNNILFGVIGTCFVLLGAFALTKKTS HHEEEEHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHKIMKTILALLLMTTVFLPFSSVQAAPTDVVNIPDPYLKEGLKNIVGNPFLDDLTEADM CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCCE ATINVADISYMSGSPGYPVKGLIKDLTGLDKAVNMTKLHFSNQSQIKNLDQIKNLPNLKK EEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCHHH IVGVTTGLNNISALRDMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSNPAYHKI HHEEECCCCHHHHHHCCCCHHEEECCCCCCCCCHHHHCCCCCCEEECCCEECCCCCEECC NNDEFKKFANLKSLVDLNLTWNNITDLSPLTENDHITNLNLNYNQFNNVAPIATMKNLQV CCHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEECCEEE LYLNNNNLTSIDSLSTLRGLTIAYADNNKITDLSNLKDFFEGMLTQGDYQGLQINNQTIT EEECCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCEEE LPTLNIKQGATAVSTNPTLDINGQQMPVSNISNGGTVSADNKTVSFANLPLGNNTVTYKA EEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEE TFTATSSKGVPLSYSINVSQPINVSEQSDSTINVFYQDENGNELATTETLSGKPGEDYQT EEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCH TEKTITNYQLKEIEGQPSGKFSDTDATVTYVYEKADGAPVTVKYTDDKGNELATPDTLNG HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC KLDAPYQTTAKNIAGWTVKTTPSNANGVFTNTNQTVTYVYEKADAAPVTVKYTDDQGNEL CCCCCHHHHHHCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCC ATPDTLNGKLDAPYQATAKNITGWTVKTTPSNATGVFTNTNQTVTYVYEKADAAPVTVKY CCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE TDDKGNELATPDTLNGKLDAPYQTTAKNIAGWAVKTTPSNVTGVFTNTNQIVTYVYEKAD ECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEEEECCC GAPVTVKYTDDKGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGVFTNTNQTV CCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCEEEECCCCEE TYVYEKADAAPVTVKYTDDQGNELATPDTLNGKLDAPYQTTAKNITGWTVKTTPSNATGV EEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCEE FTNTNQTVTYVYEKADAAPVTVKYTDDKGNELATPDTLNGKLDAPYQATAKNLSGWKLKT EECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE MPSNAKGVFTSESQTVNFVYVKQTDDTKKDDPKSNNPKPNNPKPDKNKPAIKINENNPKA CCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC KQTTITKQAKLPKTGDNKQNNILFGVIGTCFVLLGAFALTKKTS HHEEEEHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA