Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is yeiH [C]

Identifier: 116873580

GI number: 116873580

Start: 2200033

End: 2201040

Strand: Direct

Name: yeiH [C]

Synonym: lwe2164

Alternate gene names: 116873580

Gene position: 2200033-2201040 (Clockwise)

Preceding gene: 116873576

Following gene: 116873581

Centisome position: 78.18

GC content: 37.7

Gene sequence:

>1008_bases
ATGAATCAAATTTTATTTAAAACGAAAACTTTTTGGTATGGTATTGCGCTTACTTTCTGTATCGCTACCCTATCTTATTT
TTTGGCAAAATTACCCTTTTTAATGATTCTTGGGCAACTTGTTACTGCAATTTTAATCGGAATTATTATTCGTGCTCTTT
TTCCAGTCCCTGATAAATGGTTCACAGGTATTCAGTTTTCCAATAAAGTAATTCTTCGTGCTGGGATTATATTACTTGGT
TTTCGCTTAAACTTAGTCGATATTTATCATGCGGGATGGCGCGTATTTCTAATCGCTGCGTTATGTCTTAGTTTTGGGAT
TGCCGTTGTTTACTTTTTAGCAAAACTTTTTGGAGTGGATAAAAAACTAGCTATCCTTGTTGCATGTGGTACGGGAATTT
GCGGGGCAGCAGCTGTGGTTGCTATTTCTCCACAAGTCAAAGCGAATAATAATCAAACAGCAGTAGCCGCAACCATTATC
GCACTTCTAGGAACTATTTTTACAGTGGTTTACACTTTAATTTATCCAATTCTACCACTCGGACCAAATGGATATGGTAT
TTTTTCAGGAGCTACACTTCATGAAATTGCGCATGTTATTGCTGCAGCAGATCCAGGTGGAACAGCTGCTGTAGATATGG
CGGTTATTGTTAAACTAACACGCGTCGCATTACTGGTTCCTGTATGCTTCGTTGTTGCAAAAATGGTAAACGTTGGGACT
AAAAATCGCTTTTCTTGGGCAGAACTTCCCGTACCATGGTTCATTTTCGGTTTTCTAGCTACAAGTGCAATTAATAGTTT
TGGAATTATTCCTACATCAATTACTGATTTTCTAGTTATCTGTGCTTATTTTCTTATCGCTATGTCAATGGGCGGTCTTG
GATTAAATGTCCACTTACCTTCTTTTGGAAAAATGGGTGGAAAGCCTTTTGCAGCAGCGTTTATTGGTTCTATATTGCTC
TCTCTATTTGGCCTAGCGTTAGTACTTTTGTTTCATTTAGCAGGTTAA

Upstream 100 bases:

>100_bases
CCCCTCCATAAATAAAACTTATTAATAATATAATTAATATAAATTTTACTAATAAAATAAGAAATGGTAAAGTAAAAGCA
TAAAAGAAAGGAGAATGGAT

Downstream 100 bases:

>100_bases
GTTTTCCTCGTCGTCTCGATTTGTGATACAATAACAAGCACGAGGTGACTATTTCATGACGAAAGCAATTTGGACTTGCC
GAGTGTTCTTACTCGGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG
FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII
ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT
KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL
SLFGLALVLLFHLAG

Sequences:

>Translated_335_residues
MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG
FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII
ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT
KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL
SLFGLALVLLFHLAG
>Mature_335_residues
MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG
FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII
ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT
KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL
SLFGLALVLLFHLAG

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=321, Percent_Identity=33.9563862928349, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 35708; Mature: 35708

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKW
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATIIALLGTIFTVVYTLIYPILPL
CHHEEEEEECCCHHHHHHHHEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT
CCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLP
CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
SFGKMGGKPFAAAFIGSILLSLFGLALVLLFHLAG
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKW
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATIIALLGTIFTVVYTLIYPILPL
CHHEEEEEECCCHHHHHHHHEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT
CCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLP
CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
SFGKMGGKPFAAAFIGSILLSLFGLALVLLFHLAG
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]