| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is bceB [H]
Identifier: 116873550
GI number: 116873550
Start: 2164674
End: 2166614
Strand: Direct
Name: bceB [H]
Synonym: lwe2134
Alternate gene names: 116873550
Gene position: 2164674-2166614 (Clockwise)
Preceding gene: 116873549
Following gene: 116873552
Centisome position: 76.92
GC content: 33.9
Gene sequence:
>1941_bases ATGACGTTATTTGATTTAGCTAAGAAAAATATTCGACATAATTTTGTCCATTACTTTTTATATTTTGCATCGATGATTTT CAGTATTATGATTTATTTTACGTTTCTTGTGCTCTCAAAAGATCCATCCGTCGTAGCGCGAATTGACCAATCTTCCAAAC TTTCGACTGCATTTTCTAGTTCTTCTGTGATTTTACTTATATTTGTAGCGATTTTTATTCTTTATTCTAATAACTTCTTC ACAAGAAAAAGAAAAAAAGAGATTGGCCTTTATTCATTACTTGGGCTTCGCAAAAAAGAAATCGGACGTATGTTGTTTTA TGAAAACTTCATTATGGGGCTTGGAGCTCTAGTTGTTGGTATTCTTGCAGGCACATTACTTTCGAAAATTTTTGTAACGA TTTTACTTAACTTAATTAACCTTGATAGCATTGGTGGCTTTGCCTTTTCGTGGGAAGCTGTCATTCAAACGAGTATTGTA TTTGTCATCATTACATTATTCACCTCGTTTTCAGGCTACCGAATTATTTATCGCACCACTTTACTAGACTTATTCCATTC CGAAGCAAAACGCGAAAAAAGCCCAAAACCTTCTTTTATTTTGGCATTACTTTCTATCGTATTAATCGGACTTGGGTATG TGATAGCTGGACAACCACTTGAATCTAAAAATTCTATTTGGGTCCAACTTGGTTTCTCCATTGGAGCTCTCGTTATTTTA GCTTCTGTCATTATTGGTACGGCTTTATTTATTACGTTTTTCTTACCATATTTACTTACAAAACTAAGAAATAATAAACG AATTTTTTATAAAGGTAGCAATATCATTTCTACATCACAATTAACGTTTAGAATTTCATCCAATGCAAAAACATTGATAA TTATATCCATTTTAAGTGCGACAACGCTCTCTGCTATAGGGACGATAAGTAGTATTTACTATCAAGCAAATACATCTGCA AACACGTCCTCACCTTCGAGTTTTGAATATTTAGTTCCTAAAAATAACGCGACAAACAAGGAGATAATCAAAACGGCTGA AAGTGATTCAGAACACCCCGTCGAGTTTAAACAGAAAAGTAATTATTTGATTGTTAAAGCAGAAGGAACTCGACCTGATT TTGTCGAATATGATATTAATGACGGTTTTCCAGTGATGTCTGAAACAGATTATAACTCTCTTGTGAAAAAACAAGGCACA CCTGAAAAAACCGCTAAACTAAAAGAAAACGAAGCACAAATGGTCCTTTCAGTCACGTATGATGAAAGAGCAAGGAAAGA AATGATAGGAGAAAAATATACGCTAAAAGCCACCAATAAACCAACCGTTGAAATAAAATCAGTTGTGGTGAATTCACCTA TTGCTTCTGTTCCCGGCCTACTTGTTCTTCCAGATAAACAAGTAGCACAATTAACAAGTGATCAAACCATTCCTTCTCAA GCCGTCGAATCTATTACTATCCAGAACCCAAAACAAGCCCATGATTTAGATAAAAAAATGCAGGCTGTTGTTCCAGAAGA TTCCCATCTTATTTCTTATACAAATACCTATCAGCAAATCATCACAGTAACGGGTGTACTTCTATTTATAGGCATGTTTA TTGGATTCGTATTCTTAGCAGCAACAGGAAGTATCATCTACTTCAAACAGCTAACAGAAGCTTACAACGACATCGGCACA TTCGATATATTGAAAAAAATTGGTCTTAATCGAAAAGATATCCGTAAAATACTTGCTAAACAATTACTAGTTGTTTTCTT AATTCCTCTCGTTATTGGGATTCTTCATAGTAGTTTCGCATTAATCGGACTTTCACACATGTTAGCACTAGACTTAACAT TACCAGTTGTCATTTCTACTGGTGTCTACACATTAATGTATATAGTTTATTATTTTGTGACATTAAACAGCTACACGAAT ATCGTTTTTGGTAAAAAATAA
Upstream 100 bases:
>100_bases GACGGAGAATTATATACAGAAATTTATCGTGGAACAAAAACACGTAAGGAGTTCTTCCAAAAAATTCTAGACGTCCTTGC AAAACTGGGGGGCGACTCAG
Downstream 100 bases:
>100_bases AAATCAGCCCTCTAATTAAGTTTAGAGGGCTGTCGTTATTTTTTCGCAATATAAGCAAATATTCCCGATAGAAAAGCCGA TGATCCCATGAGAAACTGTA
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSVVARIDQSSKLSTAFSSSSVILLIFVAIFILYSNNFF TRKRKKEIGLYSLLGLRKKEIGRMLFYENFIMGLGALVVGILAGTLLSKIFVTILLNLINLDSIGGFAFSWEAVIQTSIV FVIITLFTSFSGYRIIYRTTLLDLFHSEAKREKSPKPSFILALLSIVLIGLGYVIAGQPLESKNSIWVQLGFSIGALVIL ASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNIISTSQLTFRISSNAKTLIIISILSATTLSAIGTISSIYYQANTSA NTSSPSSFEYLVPKNNATNKEIIKTAESDSEHPVEFKQKSNYLIVKAEGTRPDFVEYDINDGFPVMSETDYNSLVKKQGT PEKTAKLKENEAQMVLSVTYDERARKEMIGEKYTLKATNKPTVEIKSVVVNSPIASVPGLLVLPDKQVAQLTSDQTIPSQ AVESITIQNPKQAHDLDKKMQAVVPEDSHLISYTNTYQQIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGT FDILKKIGLNRKDIRKILAKQLLVVFLIPLVIGILHSSFALIGLSHMLALDLTLPVVISTGVYTLMYIVYYFVTLNSYTN IVFGKK
Sequences:
>Translated_646_residues MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSVVARIDQSSKLSTAFSSSSVILLIFVAIFILYSNNFF TRKRKKEIGLYSLLGLRKKEIGRMLFYENFIMGLGALVVGILAGTLLSKIFVTILLNLINLDSIGGFAFSWEAVIQTSIV FVIITLFTSFSGYRIIYRTTLLDLFHSEAKREKSPKPSFILALLSIVLIGLGYVIAGQPLESKNSIWVQLGFSIGALVIL ASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNIISTSQLTFRISSNAKTLIIISILSATTLSAIGTISSIYYQANTSA NTSSPSSFEYLVPKNNATNKEIIKTAESDSEHPVEFKQKSNYLIVKAEGTRPDFVEYDINDGFPVMSETDYNSLVKKQGT PEKTAKLKENEAQMVLSVTYDERARKEMIGEKYTLKATNKPTVEIKSVVVNSPIASVPGLLVLPDKQVAQLTSDQTIPSQ AVESITIQNPKQAHDLDKKMQAVVPEDSHLISYTNTYQQIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGT FDILKKIGLNRKDIRKILAKQLLVVFLIPLVIGILHSSFALIGLSHMLALDLTLPVVISTGVYTLMYIVYYFVTLNSYTN IVFGKK >Mature_645_residues TLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSVVARIDQSSKLSTAFSSSSVILLIFVAIFILYSNNFFT RKRKKEIGLYSLLGLRKKEIGRMLFYENFIMGLGALVVGILAGTLLSKIFVTILLNLINLDSIGGFAFSWEAVIQTSIVF VIITLFTSFSGYRIIYRTTLLDLFHSEAKREKSPKPSFILALLSIVLIGLGYVIAGQPLESKNSIWVQLGFSIGALVILA SVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNIISTSQLTFRISSNAKTLIIISILSATTLSAIGTISSIYYQANTSAN TSSPSSFEYLVPKNNATNKEIIKTAESDSEHPVEFKQKSNYLIVKAEGTRPDFVEYDINDGFPVMSETDYNSLVKKQGTP EKTAKLKENEAQMVLSVTYDERARKEMIGEKYTLKATNKPTVEIKSVVVNSPIASVPGLLVLPDKQVAQLTSDQTIPSQA VESITIQNPKQAHDLDKKMQAVVPEDSHLISYTNTYQQIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGTF DILKKIGLNRKDIRKILAKQLLVVFLIPLVIGILHSSFALIGLSHMLALDLTLPVVISTGVYTLMYIVYYFVTLNSYTNI VFGKK
Specific function: Part of the ABC transporter complex BceAB (TC 3.A.1.123.5) involved in bacitracin export [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 72076; Mature: 71944
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSVVARIDQSSKLSTAFSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCC SSVILLIFVAIFILYSNNFFTRKRKKEIGLYSLLGLRKKEIGRMLFYENFIMGLGALVVG CCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILAGTLLSKIFVTILLNLINLDSIGGFAFSWEAVIQTSIVFVIITLFTSFSGYRIIYRTT HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH LLDLFHSEAKREKSPKPSFILALLSIVLIGLGYVIAGQPLESKNSIWVQLGFSIGALVIL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHH ASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNIISTSQLTFRISSNAKTLIIISILSA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECEEEEEECCCCCEEEEEEEHHH TTLSAIGTISSIYYQANTSANTSSPSSFEYLVPKNNATNKEIIKTAESDSEHPVEFKQKS HHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHHCCC NYLIVKAEGTRPDFVEYDINDGFPVMSETDYNSLVKKQGTPEKTAKLKENEAQMVLSVTY CEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEEEH DERARKEMIGEKYTLKATNKPTVEIKSVVVNSPIASVPGLLVLPDKQVAQLTSDQTIPSQ HHHHHHHHCCCCEEEEECCCCCEEEEHEEECCCHHHCCCEEEECCHHHHHHCCCCCCHHH AVESITIQNPKQAHDLDKKMQAVVPEDSHLISYTNTYQQIITVTGVLLFIGMFIGFVFLA HHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGSIIYFKQLTEAYNDIGTFDILKKIGLNRKDIRKILAKQLLVVFLIPLVIGILHSSFA HCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGLSHMLALDLTLPVVISTGVYTLMYIVYYFVTLNSYTNIVFGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure TLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSVVARIDQSSKLSTAFSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCC SSVILLIFVAIFILYSNNFFTRKRKKEIGLYSLLGLRKKEIGRMLFYENFIMGLGALVVG CCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILAGTLLSKIFVTILLNLINLDSIGGFAFSWEAVIQTSIVFVIITLFTSFSGYRIIYRTT HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH LLDLFHSEAKREKSPKPSFILALLSIVLIGLGYVIAGQPLESKNSIWVQLGFSIGALVIL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHH ASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNIISTSQLTFRISSNAKTLIIISILSA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECEEEEEECCCCCEEEEEEEHHH TTLSAIGTISSIYYQANTSANTSSPSSFEYLVPKNNATNKEIIKTAESDSEHPVEFKQKS HHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHHCCC NYLIVKAEGTRPDFVEYDINDGFPVMSETDYNSLVKKQGTPEKTAKLKENEAQMVLSVTY CEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEEEH DERARKEMIGEKYTLKATNKPTVEIKSVVVNSPIASVPGLLVLPDKQVAQLTSDQTIPSQ HHHHHHHHCCCCEEEEECCCCCEEEEHEEECCCHHHCCCEEEECCHHHHHHCCCCCCHHH AVESITIQNPKQAHDLDKKMQAVVPEDSHLISYTNTYQQIITVTGVLLFIGMFIGFVFLA HHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGSIIYFKQLTEAYNDIGTFDILKKIGLNRKDIRKILAKQLLVVFLIPLVIGILHSSFA HCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGLSHMLALDLTLPVVISTGVYTLMYIVYYFVTLNSYTNIVFGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 14612242; 12890034 [H]