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The map label for this gene is bdlA [H]

Identifier: 116873133

GI number: 116873133

Start: 1740495

End: 1741397

Strand: Direct

Name: bdlA [H]

Synonym: lwe1717

Alternate gene names: 116873133

Gene position: 1740495-1741397 (Clockwise)

Preceding gene: 116873131

Following gene: 116873134

Centisome position: 61.85

GC content: 36.21

Gene sequence:

>903_bases
ATGAATGTTTATGCGGACAAAGAAGACGCAACTCTCCTTCTCGATGGTTTACTTCAAAATGTAGCAATAATGCGTTTTGA
TATTAATAAAAAAGTAACTTACGTGAATGCACTTTTTGCGGAAGCTATGGGATATACGGAAGAAGAAATGTTGGAATTAT
CTCATCCGGATTTATGCTTTCCTGATTTTGTTCAAACAGCAACTTACAAAGAAATGTGGACCAATCTACTTGCTGGTCAA
AAATTTCAAAATAAAATTGAACGAAAAAATGCTCGCGGTGAACGAGTTTGGTTTGAAGCAACTTATATACCCATTTTTCT
TGAAAATACAGTTATAGGTGTGGCAAAAATCGCCACTGATATCACACGAAGAGAAGAAACTGTGCATGATTTTGCTTCTG
GTTTAAAAAATATGGCAACGAATTTAAAAGAACATTCTAGTGTTGGAAAAACGCGTAGTGAAGCTCTCCTTAATCTCGTG
AAATCAATCACGAAAGAATCAAACGAAAATACAGTTACACTGCATGATTTACAAACAGAAGCACAAAATATTCACGGAAT
TATTAATACAATTAATGGTATTGCTTCTCAAACAAATTTACTTGCACTGAATGCAGCGATTGAAGCCGCACGTGCTGGCG
ATGCTGGGCGTGGATTTAGTGTTGTAGCTGAAGAAGTGCGCAAACTTTCGAGTCGTGTGGAAGAAGCTATTAAAGAAGTG
GAAAAAAGTGTCAATGGTATCACACAAGAAATTAATACGATTTCAAGTGGTACAGAACGTGTCGAAGCAAAAGTCGAGGA
AAGCCAAGAAGTCCTTATTTTATCTTTAGAAGATTTTAATCAAATTGAATCTGCCTCTACTGCCTTGGATCAAAATGCCG
GTGCTTTCACAAAAATGATTTAA

Upstream 100 bases:

>100_bases
ATTTTATTAAAAAATAAATCTTCTATTACGAATACAAGTGTGTTATTATGTTGTTGTTAGTCGTTTTTATATTATTTTTC
TAAAAAATGGAGGTTTTACA

Downstream 100 bases:

>100_bases
CCGACTGAAAAAAGGAGCGAAGAAGTCTTGAAACTAATTGGAAAACATCCTTCTGGTCGTGCCATTATTATTCGTTTGAA
CAACCAAGAGTACCACTATG

Product: methyl-accepting chemotaxis protein family protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNVYADKEDATLLLDGLLQNVAIMRFDINKKVTYVNALFAEAMGYTEEEMLELSHPDLCFPDFVQTATYKEMWTNLLAGQ
KFQNKIERKNARGERVWFEATYIPIFLENTVIGVAKIATDITRREETVHDFASGLKNMATNLKEHSSVGKTRSEALLNLV
KSITKESNENTVTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEV
EKSVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFNQIESASTALDQNAGAFTKMI

Sequences:

>Translated_300_residues
MNVYADKEDATLLLDGLLQNVAIMRFDINKKVTYVNALFAEAMGYTEEEMLELSHPDLCFPDFVQTATYKEMWTNLLAGQ
KFQNKIERKNARGERVWFEATYIPIFLENTVIGVAKIATDITRREETVHDFASGLKNMATNLKEHSSVGKTRSEALLNLV
KSITKESNENTVTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEV
EKSVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFNQIESASTALDQNAGAFTKMI
>Mature_300_residues
MNVYADKEDATLLLDGLLQNVAIMRFDINKKVTYVNALFAEAMGYTEEEMLELSHPDLCFPDFVQTATYKEMWTNLLAGQ
KFQNKIERKNARGERVWFEATYIPIFLENTVIGVAKIATDITRREETVHDFASGLKNMATNLKEHSSVGKTRSEALLNLV
KSITKESNENTVTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEV
EKSVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFNQIESASTALDQNAGAFTKMI

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=172, Percent_Identity=36.6279069767442, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788194, Length=83, Percent_Identity=56.6265060240964, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788195, Length=83, Percent_Identity=50.6024096385542, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787690, Length=89, Percent_Identity=49.438202247191, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789453, Length=91, Percent_Identity=46.1538461538462, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 33247; Mature: 33247

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYADKEDATLLLDGLLQNVAIMRFDINKKVTYVNALFAEAMGYTEEEMLELSHPDLCF
CCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC
PDFVQTATYKEMWTNLLAGQKFQNKIERKNARGERVWFEATYIPIFLENTVIGVAKIATD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHH
ITRREETVHDFASGLKNMATNLKEHSSVGKTRSEALLNLVKSITKESNENTVTLHDLQTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
AQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEV
HHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKSVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFNQIESASTALDQNAGAFTKMI
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MNVYADKEDATLLLDGLLQNVAIMRFDINKKVTYVNALFAEAMGYTEEEMLELSHPDLCF
CCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC
PDFVQTATYKEMWTNLLAGQKFQNKIERKNARGERVWFEATYIPIFLENTVIGVAKIATD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHH
ITRREETVHDFASGLKNMATNLKEHSSVGKTRSEALLNLVKSITKESNENTVTLHDLQTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
AQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEV
HHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKSVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFNQIESASTALDQNAGAFTKMI
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]