| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is phnB [C]
Identifier: 116873067
GI number: 116873067
Start: 1658953
End: 1659375
Strand: Direct
Name: phnB [C]
Synonym: lwe1651
Alternate gene names: 116873067
Gene position: 1658953-1659375 (Clockwise)
Preceding gene: 116873066
Following gene: 116873068
Centisome position: 58.95
GC content: 36.17
Gene sequence:
>423_bases ATGATAAAAGCAACAGTACCTTACTTTACTTTTGACGGAGAAGCCCAAGAAGCTCTAAATTTCTATAAAAAAGTATTTCA AGCTGAAATCACCCAGACTCGCTACTTTCATGAAATGGAAGGATTTTCAGGAGATAACCTCTTAGGCGAACGAATTCTTC ACGCTAGACTTACTAAAGATGAAAAAGATTTATTTTACTTCTCCGATACATTGGAAGGCGAAACAGATGCGGGAAATCGA CTGTCACTTGCGGTTAATTTTCAAACCGAAGAAAGCTTTGTCCATGCGTTCGTACTACTTTCTAAAACAGGAACAGTTGA AGTTCCTATTCAAAAGACATTTTGGGATGCTAAATATGCCAAAGTAATTGATCACTATAGTATTGACTGGCATCTTAATC TAGAAAATGAGACTACTACTTAA
Upstream 100 bases:
>100_bases TAATATATAAAGTTAGAAGAAAGCGCAAGTCCATCCCAGGGCTTGCGCTTTCGCTTTAGTGTCTAAATTAGTATAATAGA ACAAGAATGGAGTTGATTTA
Downstream 100 bases:
>100_bases GTATGACTTTTCCCCATTCTCTAGCCGAATGTCTTAAGAACGAAAAAATAGTATAATTTAACAGTGAGAGAAAAAAAGGA GTGAGTTTATGACTGAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase; Glyoxalase/Bleomycin Resistance Protein; PhnB Protein; Glyoxalase Family Protein; Protein Conserved In Bacteria
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MIKATVPYFTFDGEAQEALNFYKKVFQAEITQTRYFHEMEGFSGDNLLGERILHARLTKDEKDLFYFSDTLEGETDAGNR LSLAVNFQTEESFVHAFVLLSKTGTVEVPIQKTFWDAKYAKVIDHYSIDWHLNLENETTT
Sequences:
>Translated_140_residues MIKATVPYFTFDGEAQEALNFYKKVFQAEITQTRYFHEMEGFSGDNLLGERILHARLTKDEKDLFYFSDTLEGETDAGNR LSLAVNFQTEESFVHAFVLLSKTGTVEVPIQKTFWDAKYAKVIDHYSIDWHLNLENETTT >Mature_140_residues MIKATVPYFTFDGEAQEALNFYKKVFQAEITQTRYFHEMEGFSGDNLLGERILHARLTKDEKDLFYFSDTLEGETDAGNR LSLAVNFQTEESFVHAFVLLSKTGTVEVPIQKTFWDAKYAKVIDHYSIDWHLNLENETTT
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16216; Mature: 16216
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKATVPYFTFDGEAQEALNFYKKVFQAEITQTRYFHEMEGFSGDNLLGERILHARLTKD CCEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC EKDLFYFSDTLEGETDAGNRLSLAVNFQTEESFVHAFVLLSKTGTVEVPIQKTFWDAKYA CCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHEEEEEEEECCCEEEECHHHHHCCHHHH KVIDHYSIDWHLNLENETTT HHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MIKATVPYFTFDGEAQEALNFYKKVFQAEITQTRYFHEMEGFSGDNLLGERILHARLTKD CCEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC EKDLFYFSDTLEGETDAGNRLSLAVNFQTEESFVHAFVLLSKTGTVEVPIQKTFWDAKYA CCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHEEEEEEEECCCEEEECHHHHHCCHHHH KVIDHYSIDWHLNLENETTT HHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA