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The map label for this gene is ytsP [H]

Identifier: 116873024

GI number: 116873024

Start: 1615845

End: 1616345

Strand: Direct

Name: ytsP [H]

Synonym: lwe1608

Alternate gene names: 116873024

Gene position: 1615845-1616345 (Clockwise)

Preceding gene: 116873015

Following gene: 116873025

Centisome position: 57.42

GC content: 35.53

Gene sequence:

>501_bases
ATGATTGAAATTCAAAAAATGACTGGTACAAAAGAAGAAAATTATGCGCTTGCTTTTAAACAAGTGCAAGCAATGATTGC
CGGCGAACCAAATTTAATTGCAAATTTAAGCAATGTTTCTTCTATATTAAATCAAGCACTTTCTGATATTAATTGGGTAG
GCTTTTATTTACTAGAAAAAGAAACAAACCAATTAGTGCTCGGTCCATTCCAAGGATTACCTGCATGTATTCGTATTCCA
CTCGGTAAAGGCGTTTGCGGTTCTGCTGCCTCCGAAGAAAAAACCTATATAGTAGAAAATGTCCACGATTTCCCTGGACA
TATCGCATGTGATGCCGCCTCTAATTCAGAAATCGTTTTACCAATTGTAAAAAATGAACAGTTACTTGGTGTCCTTGATA
TTGATAGTCCCCTCTTTAATCGTTTTGATAAAGTCGATCAAATGTGGTTAGAAAAAATTCGTGATGCCATTACGCTAGAA
TTACCTAACGAAATCAATTGA

Upstream 100 bases:

>100_bases
GTAGTTAAAATCCGCTCTTTGATGAAACAAAATTCCCGAAATCCCTTGTCGTTCATGCTATACTAAAGACATTATTCAAA
AAGAAATGTGGGGATAAAAA

Downstream 100 bases:

>100_bases
CAAGCCACTAGTAATTATACTATACTGGAAGATGTGTAAAATGCAGCTTGAGTAAAATGAATGAGTGTGTTGTTTACCCC
CAGATTTAATTCTGTGGTAT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MIEIQKMTGTKEENYALAFKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASEEKTYIVENVHDFPGHIACDAASNSEIVLPIVKNEQLLGVLDIDSPLFNRFDKVDQMWLEKIRDAITLE
LPNEIN

Sequences:

>Translated_166_residues
MIEIQKMTGTKEENYALAFKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASEEKTYIVENVHDFPGHIACDAASNSEIVLPIVKNEQLLGVLDIDSPLFNRFDKVDQMWLEKIRDAITLE
LPNEIN
>Mature_166_residues
MIEIQKMTGTKEENYALAFKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIP
LGKGVCGSAASEEKTYIVENVHDFPGHIACDAASNSEIVLPIVKNEQLLGVLDIDSPLFNRFDKVDQMWLEKIRDAITLE
LPNEIN

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=143, Percent_Identity=54.5454545454545, Blast_Score=166, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6322781, Length=153, Percent_Identity=47.0588235294118, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18342; Mature: 18342

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIQKMTGTKEENYALAFKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEK
CEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEC
ETNQLVLGPFQGLPACIRIPLGKGVCGSAASEEKTYIVENVHDFPGHIACDAASNSEIVL
CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEE
PIVKNEQLLGVLDIDSPLFNRFDKVDQMWLEKIRDAITLELPNEIN
EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MIEIQKMTGTKEENYALAFKQVQAMIAGEPNLIANLSNVSSILNQALSDINWVGFYLLEK
CEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEC
ETNQLVLGPFQGLPACIRIPLGKGVCGSAASEEKTYIVENVHDFPGHIACDAASNSEIVL
CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEE
PIVKNEQLLGVLDIDSPLFNRFDKVDQMWLEKIRDAITLELPNEIN
EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]