Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872660

Identifier: 116872660

GI number: 116872660

Start: 1244800

End: 1245336

Strand: Direct

Name: 116872660

Synonym: lwe1244

Alternate gene names: NA

Gene position: 1244800-1245336 (Clockwise)

Preceding gene: 116872659

Following gene: 116872661

Centisome position: 44.23

GC content: 31.84

Gene sequence:

>537_bases
ATGAATAAAACGGGAGTAAAAATTTTAATTTTCACAGTATTATTGTTAACAATCTTGATTCCAACAAATGCAAATGCTTA
TACTAAAAACGGTCATTATATGACTAAAGCGGCGGCGAAAAATTTCAAAATTTATATTAATGGCTCTGCCGCTGGTTATA
AAAGCATAATAATCAATGGTGCAAAAGTGTGGAATGTTTCGCCTTATTTGAATACTGTAAGTTTAGGAAATGATGTGAAT
CCTCATTTTACAGTAAGTACTTCAAAAGTGGATAGAGGTAGCATAGTTGCAACAAATCAGCCCTGGATATTAAAATCGAC
ACCATCTATACGGGTTAAAAGTGAAATTACTACTTATAATGCTTTTAAATCATTATCCACTAGTGATAAGACAGAGACAA
TAGCTCATGAATTTGGACATGGCTTTGGATTAGGGCACATAACCACAAAGAATGGAATTATGTTAGCTAAGGGATTTACG
AAGAAAATAAAACCGCAAGCAGACGATTTAAATGGTATTAAATCTATATATAAATAA

Upstream 100 bases:

>100_bases
TTCATGACAAGAAACGGACATTTCATTACATTTTTGGTTATACATTATATATTTTTGATATCATTTTGAGGTAAGAAAAA
TTATAAAAGGAGACTACATC

Downstream 100 bases:

>100_bases
AAGGAGGTTTGAAAATTGAAGGGTAAATTATTAGTTGTTATTAGTTTGGCAAGTATATCTTTATTTACGGCCTGTTCGAA
TAATGAAAATGTGGATGAAA

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNKTGVKILIFTVLLLTILIPTNANAYTKNGHYMTKAAAKNFKIYINGSAAGYKSIIINGAKVWNVSPYLNTVSLGNDVN
PHFTVSTSKVDRGSIVATNQPWILKSTPSIRVKSEITTYNAFKSLSTSDKTETIAHEFGHGFGLGHITTKNGIMLAKGFT
KKIKPQADDLNGIKSIYK

Sequences:

>Translated_178_residues
MNKTGVKILIFTVLLLTILIPTNANAYTKNGHYMTKAAAKNFKIYINGSAAGYKSIIINGAKVWNVSPYLNTVSLGNDVN
PHFTVSTSKVDRGSIVATNQPWILKSTPSIRVKSEITTYNAFKSLSTSDKTETIAHEFGHGFGLGHITTKNGIMLAKGFT
KKIKPQADDLNGIKSIYK
>Mature_178_residues
MNKTGVKILIFTVLLLTILIPTNANAYTKNGHYMTKAAAKNFKIYINGSAAGYKSIIINGAKVWNVSPYLNTVSLGNDVN
PHFTVSTSKVDRGSIVATNQPWILKSTPSIRVKSEITTYNAFKSLSTSDKTETIAHEFGHGFGLGHITTKNGIMLAKGFT
KKIKPQADDLNGIKSIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19394; Mature: 19394

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTGVKILIFTVLLLTILIPTNANAYTKNGHYMTKAAAKNFKIYINGSAAGYKSIIING
CCCCCHHHHHHHHHHHHHEECCCCCEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEC
AKVWNVSPYLNTVSLGNDVNPHFTVSTSKVDRGSIVATNQPWILKSTPSIRVKSEITTYN
EEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEHH
AFKSLSTSDKTETIAHEFGHGFGLGHITTKNGIMLAKGFTKKIKPQADDLNGIKSIYK
HHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNKTGVKILIFTVLLLTILIPTNANAYTKNGHYMTKAAAKNFKIYINGSAAGYKSIIING
CCCCCHHHHHHHHHHHHHEECCCCCEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEC
AKVWNVSPYLNTVSLGNDVNPHFTVSTSKVDRGSIVATNQPWILKSTPSIRVKSEITTYN
EEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEHH
AFKSLSTSDKTETIAHEFGHGFGLGHITTKNGIMLAKGFTKKIKPQADDLNGIKSIYK
HHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA