Click here to switch to the map view.

The map label for this gene is 116872655

Identifier: 116872655

GI number: 116872655

Start: 1240978

End: 1241232

Strand: Direct

Name: 116872655

Synonym: lwe1239

Alternate gene names: NA

Gene position: 1240978-1241232 (Clockwise)

Preceding gene: 116872654

Following gene: 116872656

Centisome position: 44.1

GC content: 40.39

Gene sequence:

>255_bases
ATGAAAATTAATTGGAAAGTACGAATGAAATCGAAAGTTTTCTGGGTATCTGTTATCCCGCTTGTACTAGTTTTAGTACA
GCAAGTACTTGGTTGGTTCGGCGTAACAATTCCTGCGGACACAATTAACAGAGAGGCGCTAGACATGATTAATAGTGTGT
TTCTGCTACTGGGTGTCTTGGGTGTAGTTAATGACCCAACAACGCCTGGCGCAAGTGATAGCGAACTAGTCCAAAATAGA
AAGGAAGTTAAATAA

Upstream 100 bases:

>100_bases
GAGCGATCAAGCACAGGTTTTTACTGGGCAATAGGGTTAGTAGCTGTGTTGGTATTAAGTTCTATTGTACGTGGTTTTTT
AATGTGAGGGAGGAATAATA

Downstream 100 bases:

>100_bases
TGAACACATATTATAATGTAACTTCAAATGCAGGTCATTCGCATAAAGTTGAAGGAGCAACCGGAAACGGATACAAAGAA
CATGTTGAAGCACTTAAGTA

Product: phage holin-like protein

Products: NA

Alternate protein names: Holin Phage Phi LC3 Family

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKINWKVRMKSKVFWVSVIPLVLVLVQQVLGWFGVTIPADTINREALDMINSVFLLLGVLGVVNDPTTPGASDSELVQNR
KEVK

Sequences:

>Translated_84_residues
MKINWKVRMKSKVFWVSVIPLVLVLVQQVLGWFGVTIPADTINREALDMINSVFLLLGVLGVVNDPTTPGASDSELVQNR
KEVK
>Mature_84_residues
MKINWKVRMKSKVFWVSVIPLVLVLVQQVLGWFGVTIPADTINREALDMINSVFLLLGVLGVVNDPTTPGASDSELVQNR
KEVK

Specific function: Unknown

COG id: COG5546

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9363; Mature: 9363

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINWKVRMKSKVFWVSVIPLVLVLVQQVLGWFGVTIPADTINREALDMINSVFLLLGVL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH
GVVNDPTTPGASDSELVQNRKEVK
HHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKINWKVRMKSKVFWVSVIPLVLVLVQQVLGWFGVTIPADTINREALDMINSVFLLLGVL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH
GVVNDPTTPGASDSELVQNRKEVK
HHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA