Click here to switch to the map view.

The map label for this gene is 116872641

Identifier: 116872641

GI number: 116872641

Start: 1229544

End: 1230728

Strand: Direct

Name: 116872641

Synonym: lwe1225

Alternate gene names: NA

Gene position: 1229544-1230728 (Clockwise)

Preceding gene: 116872640

Following gene: 116872642

Centisome position: 43.69

GC content: 37.05

Gene sequence:

>1185_bases
ATGGCATTAAAACAATTAATGATTCAGAAAAAATTAGATTCTAAACGAAGTGATTTAGAGGAACTGGAGACACGTTCAAA
GACATTTAAAGAACGCGAGGAGGAATTAACTCGTGCGCTTGAAGAAGCAAAAACAGAAGAAGAAGTAAGTACTGTTGAAA
AGAGCGTAGATGAGTTAGAAAGCGAAAAAGAAAAGTTAGAAAAAGAACGTGATGAATTGACAGCAAAAATTGAAGAACTA
GAAAAAGAGTTAGAAGAAGCTAATGGTGAAACTACTTCAGATGATGTAGAAAAAGGAGAGGGCGAGGAACGCATGGGAAA
ATATAAAGATAAAGAATTACGTAGTGCAGTAAATACATTTATTCGAACAAAAGGTCAAACACGAGCTGGGTTAGTATCTA
CTGACGTGGGTGTTGTGATTCCAGAAGAGATTATTTATTCACCAGAAAGAGAAGTAAAAACTGTCACTAACTTGGCAGAA
CTGGTTTCTAAAACAAAAGTTAATACAGCGTCTGGGAAATATCCGATTTTAAAACGTGCCACTTCCCGATTGAATTCAGT
TACTGAATTAACTGCAAATCCTGAATTAGCTAAACCAGAATTTGTTCAAGTCAACTGGGAAGTTGAAACGTATCGTGGAG
CTATTCCGATTTCACAAGAGTCCATCGATGATGCTGCTGTTGATTTAGTTAGTATTGTATCTGAGAATGCACAAGAACAA
AAAGTCAATACAACAAACTATGCGATTTCAGAAGTGTTAAAAACTTTCACAGCAAAAACAGTAGCGAATACAGATGACAT
CAAACAAATCCTTAACGTCACATTAGATCCAGCGTATGAAAGAACTGCAGTCGTGTCACAAAGTTTTTTACAATGGGTTG
ATACTTTGAAAGATTCAGACGGTCAATATATTCTACATCGTGACATTACTTCAACAAGTGGAACGTCGCTTTTTGGCATT
AAACTAGAAGTTGTAAACGATGAATTACTTGGACTCGCAGGAGAAGCGCATGCGTTCTTAGGTGATTTGAAGCGTGCGGT
ACTATTTGCAGATCGCACCGACATCACCGCTCGTTGGGTAGATAATGAAATCTATGGTCAGTATTTACAAGTCGGCACTA
GATTTGATGTTAAAAAAGCTGATTCTAAAGCGGGTTATTTCCTAACTTTCACTAAAGGAGCGTAA

Upstream 100 bases:

>100_bases
ATTCAGACACTGGAGTGGAAGCAAGACAAAATGATGTCAAAAAACATGAACAACGAAAATTAGAAGCAAAGAAAAATCAA
TTAAAGGAGAGATTGAAGTT

Downstream 100 bases:

>100_bases
TCATATGAGTAAATATGTCGTATTGAAAACTTTCTCTGATTTAGAAGATGGTAATCATATTTACCAAGAAGGAGACAAAT
ATCCCCGTCAAGGTAAAGCA

Product: phage capsid protein

Products: NA

Alternate protein names: Capsid Protein; HK97 Family Phage Capsid Protein; Head Protein; Phage-Related Prohead Protease; Phage Capsid Protein HK; Phase Capsid Protein; Head Protein-Like Protein; Phage-Related Head Protein; Phage Capsid Protein; Phage Head Protein; Phage-Like Protein; Phage Capsid Family; Bacteriophage Capsid Protein; Peptidase U; Seryl-TRNA Synthetase Seryl-TRNA(Ser/Sec) Synthetase; Prophage Lp3 Protein; Phage Protein

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MALKQLMIQKKLDSKRSDLEELETRSKTFKEREEELTRALEEAKTEEEVSTVEKSVDELESEKEKLEKERDELTAKIEEL
EKELEEANGETTSDDVEKGEGEERMGKYKDKELRSAVNTFIRTKGQTRAGLVSTDVGVVIPEEIIYSPEREVKTVTNLAE
LVSKTKVNTASGKYPILKRATSRLNSVTELTANPELAKPEFVQVNWEVETYRGAIPISQESIDDAAVDLVSIVSENAQEQ
KVNTTNYAISEVLKTFTAKTVANTDDIKQILNVTLDPAYERTAVVSQSFLQWVDTLKDSDGQYILHRDITSTSGTSLFGI
KLEVVNDELLGLAGEAHAFLGDLKRAVLFADRTDITARWVDNEIYGQYLQVGTRFDVKKADSKAGYFLTFTKGA

Sequences:

>Translated_394_residues
MALKQLMIQKKLDSKRSDLEELETRSKTFKEREEELTRALEEAKTEEEVSTVEKSVDELESEKEKLEKERDELTAKIEEL
EKELEEANGETTSDDVEKGEGEERMGKYKDKELRSAVNTFIRTKGQTRAGLVSTDVGVVIPEEIIYSPEREVKTVTNLAE
LVSKTKVNTASGKYPILKRATSRLNSVTELTANPELAKPEFVQVNWEVETYRGAIPISQESIDDAAVDLVSIVSENAQEQ
KVNTTNYAISEVLKTFTAKTVANTDDIKQILNVTLDPAYERTAVVSQSFLQWVDTLKDSDGQYILHRDITSTSGTSLFGI
KLEVVNDELLGLAGEAHAFLGDLKRAVLFADRTDITARWVDNEIYGQYLQVGTRFDVKKADSKAGYFLTFTKGA
>Mature_393_residues
ALKQLMIQKKLDSKRSDLEELETRSKTFKEREEELTRALEEAKTEEEVSTVEKSVDELESEKEKLEKERDELTAKIEELE
KELEEANGETTSDDVEKGEGEERMGKYKDKELRSAVNTFIRTKGQTRAGLVSTDVGVVIPEEIIYSPEREVKTVTNLAEL
VSKTKVNTASGKYPILKRATSRLNSVTELTANPELAKPEFVQVNWEVETYRGAIPISQESIDDAAVDLVSIVSENAQEQK
VNTTNYAISEVLKTFTAKTVANTDDIKQILNVTLDPAYERTAVVSQSFLQWVDTLKDSDGQYILHRDITSTSGTSLFGIK
LEVVNDELLGLAGEAHAFLGDLKRAVLFADRTDITARWVDNEIYGQYLQVGTRFDVKKADSKAGYFLTFTKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44184; Mature: 44053

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKQLMIQKKLDSKRSDLEELETRSKTFKEREEELTRALEEAKTEEEVSTVEKSVDELE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEKEKLEKERDELTAKIEELEKELEEANGETTSDDVEKGEGEERMGKYKDKELRSAVNTF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHH
IRTKGQTRAGLVSTDVGVVIPEEIIYSPEREVKTVTNLAELVSKTKVNTASGKYPILKRA
HHCCCCCCCCEEECCCCEEECHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TSRLNSVTELTANPELAKPEFVQVNWEVETYRGAIPISQESIDDAAVDLVSIVSENAQEQ
HHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
KVNTTNYAISEVLKTFTAKTVANTDDIKQILNVTLDPAYERTAVVSQSFLQWVDTLKDSD
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GQYILHRDITSTSGTSLFGIKLEVVNDELLGLAGEAHAFLGDLKRAVLFADRTDITARWV
CCEEEEECCCCCCCCEEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEC
DNEIYGQYLQVGTRFDVKKADSKAGYFLTFTKGA
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
ALKQLMIQKKLDSKRSDLEELETRSKTFKEREEELTRALEEAKTEEEVSTVEKSVDELE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEKEKLEKERDELTAKIEELEKELEEANGETTSDDVEKGEGEERMGKYKDKELRSAVNTF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHH
IRTKGQTRAGLVSTDVGVVIPEEIIYSPEREVKTVTNLAELVSKTKVNTASGKYPILKRA
HHCCCCCCCCEEECCCCEEECHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TSRLNSVTELTANPELAKPEFVQVNWEVETYRGAIPISQESIDDAAVDLVSIVSENAQEQ
HHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
KVNTTNYAISEVLKTFTAKTVANTDDIKQILNVTLDPAYERTAVVSQSFLQWVDTLKDSD
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GQYILHRDITSTSGTSLFGIKLEVVNDELLGLAGEAHAFLGDLKRAVLFADRTDITARWV
CCEEEEECCCCCCCCEEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEC
DNEIYGQYLQVGTRFDVKKADSKAGYFLTFTKGA
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA