Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116872634

Identifier: 116872634

GI number: 116872634

Start: 1223784

End: 1224164

Strand: Direct

Name: 116872634

Synonym: lwe1218

Alternate gene names: NA

Gene position: 1223784-1224164 (Clockwise)

Preceding gene: 116872633

Following gene: 116872635

Centisome position: 43.49

GC content: 32.55

Gene sequence:

>381_bases
ATGAAACTATATCATACAGAAACACAAGAAGATTATAATGCGTTGATGGCATTCGTGGAGAAAAAAGGATATGAATGGAA
TACAAAAGAAAAACCTACAGAATACAATTGTTGGAACATTTTTAAGAAGGAAACTGTAATAGTAATAGAATATGATATTA
ATTTAGGTTTTGCGTCAAAAGAATATTGTGAAAGAGTATATTCTGATACACCAATCAAAAAATACAAAGTGAAACAAGAC
GAAGTTGCGAAGTGGTTCGATGACGCTGCCGGGAACATACTTAAATACGTTTCGCGTTATGAACACAAGAACCGCATTGA
AGATTTGAAGGAAGCACAGTTTTATTTGAATGATTTGATTAACTGGATGGAGAGTGATTAA

Upstream 100 bases:

>100_bases
AATAACACCTGCCTTGTGTGGAGTAGCTAGGAGCGCAGAGGAAGCATTGCAGATTGTTGAGGGGTTACATTTACATTGAT
GACAGCATAAGGAGGAGACT

Downstream 100 bases:

>100_bases
ATGTCAAAACGATTACGACAAGCGCATTATAAATTAATTGAAGATGAACTTCGTTACTATCATTCTACAAAAAAAGAAAT
ACTAGAAAAACGTGCAAACA

Product: phage-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKLYHTETQEDYNALMAFVEKKGYEWNTKEKPTEYNCWNIFKKETVIVIEYDINLGFASKEYCERVYSDTPIKKYKVKQD
EVAKWFDDAAGNILKYVSRYEHKNRIEDLKEAQFYLNDLINWMESD

Sequences:

>Translated_126_residues
MKLYHTETQEDYNALMAFVEKKGYEWNTKEKPTEYNCWNIFKKETVIVIEYDINLGFASKEYCERVYSDTPIKKYKVKQD
EVAKWFDDAAGNILKYVSRYEHKNRIEDLKEAQFYLNDLINWMESD
>Mature_126_residues
MKLYHTETQEDYNALMAFVEKKGYEWNTKEKPTEYNCWNIFKKETVIVIEYDINLGFASKEYCERVYSDTPIKKYKVKQD
EVAKWFDDAAGNILKYVSRYEHKNRIEDLKEAQFYLNDLINWMESD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYHTETQEDYNALMAFVEKKGYEWNTKEKPTEYNCWNIFKKETVIVIEYDINLGFASK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCH
EYCERVYSDTPIKKYKVKQDEVAKWFDDAAGNILKYVSRYEHKNRIEDLKEAQFYLNDLI
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NWMESD
HHHCCC
>Mature Secondary Structure
MKLYHTETQEDYNALMAFVEKKGYEWNTKEKPTEYNCWNIFKKETVIVIEYDINLGFASK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCH
EYCERVYSDTPIKKYKVKQDEVAKWFDDAAGNILKYVSRYEHKNRIEDLKEAQFYLNDLI
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NWMESD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA