| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872629
Identifier: 116872629
GI number: 116872629
Start: 1218254
End: 1218946
Strand: Direct
Name: 116872629
Synonym: lwe1213
Alternate gene names: NA
Gene position: 1218254-1218946 (Clockwise)
Preceding gene: 116872628
Following gene: 116872630
Centisome position: 43.29
GC content: 32.9
Gene sequence:
>693_bases TTGTTGGAATTTATTCAATCGGAAGAAATGAAGAGGTCAGAGTATTTTAATATTATGATTTATGCCAAACCAGGTGCAGG TAAAACAACTACAATTAAATACTTAAAAGGTAAAACGTTAATGTTAGATTGCGATGGCACGTCAAAAGTTTTAAGTGGTT TGCCTGATATCACAATTGCAACATTGAATCCTCGTAATCCCGTGCAAGACATGGCAGATTTTTATGGATATGCAAAAACA CACGCGGATGAATACGACAATGTAGTAATTGATAATTTGAGTCATTATCAAAAACTGTGGTTAATGTTCAATGGAAGAAA TACTAAATCAGGGCAACCGGAGTTACAACATTATGGGATATTTGATACACATTTAATTGATATGATTTCCGTATTTAATA ACTTAGCAAACACAAATATTGTTTATACCGCATGGGAAAATACACGACAAATTCAATTAGAAAGTGGTCAACTTTATAAT CAGTTTTTACCGGATATTAGAGAAAAAGTAGTTAATCATGTGATGGGAATTGTTCCAGTAGTTGCGAGATTAATACGAAA TCCTGAAACTGGACAACGAGGCTTTCTACTAACAGAGAATAATGGTAATTTTGCAAAAAACCAGTTAGATAATAGAGAAT TCGCCTTACAAGAAGACCTATTCAAAATTGGTGATATTGATGCTAAAGCTTAG
Upstream 100 bases:
>100_bases AGATAAAACAAAATTAGGCGATGATTTGAAGAAAGGTATTGAGGTACCAGGTGCGAAAATTATTCAAACAGAAAGATTGC AAATAAGATAAGGAGGGGTT
Downstream 100 bases:
>100_bases AGAATATCAACAAGAAATTATAAATGATGTAAAGGGGGCTTTTTTACAGGGATATAACAGACCATGTGTCGTTGCTCCCT GCGGTTAGGTGCTGGCAAAT
Product: phage nucleotide-binding protein, putative
Products: NA
Alternate protein names: ATPase Involved In DNA Replication Initiation
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLEFIQSEEMKRSEYFNIMIYAKPGAGKTTTIKYLKGKTLMLDCDGTSKVLSGLPDITIATLNPRNPVQDMADFYGYAKT HADEYDNVVIDNLSHYQKLWLMFNGRNTKSGQPELQHYGIFDTHLIDMISVFNNLANTNIVYTAWENTRQIQLESGQLYN QFLPDIREKVVNHVMGIVPVVARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQEDLFKIGDIDAKA
Sequences:
>Translated_230_residues MLEFIQSEEMKRSEYFNIMIYAKPGAGKTTTIKYLKGKTLMLDCDGTSKVLSGLPDITIATLNPRNPVQDMADFYGYAKT HADEYDNVVIDNLSHYQKLWLMFNGRNTKSGQPELQHYGIFDTHLIDMISVFNNLANTNIVYTAWENTRQIQLESGQLYN QFLPDIREKVVNHVMGIVPVVARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQEDLFKIGDIDAKA >Mature_230_residues MLEFIQSEEMKRSEYFNIMIYAKPGAGKTTTIKYLKGKTLMLDCDGTSKVLSGLPDITIATLNPRNPVQDMADFYGYAKT HADEYDNVVIDNLSHYQKLWLMFNGRNTKSGQPELQHYGIFDTHLIDMISVFNNLANTNIVYTAWENTRQIQLESGQLYN QFLPDIREKVVNHVMGIVPVVARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQEDLFKIGDIDAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26277; Mature: 26277
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFIQSEEMKRSEYFNIMIYAKPGAGKTTTIKYLKGKTLMLDCDGTSKVLSGLPDITIA CCCCHHHHHHHHHCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHCCCCEEEE TLNPRNPVQDMADFYGYAKTHADEYDNVVIDNLSHYQKLWLMFNGRNTKSGQPELQHYGI EECCCCHHHHHHHHHHHHHHCCCCCCCEEHHCHHHHEEEEEEEECCCCCCCCCCHHHCCC FDTHLIDMISVFNNLANTNIVYTAWENTRQIQLESGQLYNQFLPDIREKVVNHVMGIVPV HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQEDLFKIGDIDAKA HHHHHCCCCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLEFIQSEEMKRSEYFNIMIYAKPGAGKTTTIKYLKGKTLMLDCDGTSKVLSGLPDITIA CCCCHHHHHHHHHCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHCCCCEEEE TLNPRNPVQDMADFYGYAKTHADEYDNVVIDNLSHYQKLWLMFNGRNTKSGQPELQHYGI EECCCCHHHHHHHHHHHHHHCCCCCCCEEHHCHHHHEEEEEEEECCCCCCCCCCHHHCCC FDTHLIDMISVFNNLANTNIVYTAWENTRQIQLESGQLYNQFLPDIREKVVNHVMGIVPV HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQEDLFKIGDIDAKA HHHHHCCCCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA