| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872621
Identifier: 116872621
GI number: 116872621
Start: 1214457
End: 1215023
Strand: Direct
Name: 116872621
Synonym: lwe1205
Alternate gene names: NA
Gene position: 1214457-1215023 (Clockwise)
Preceding gene: 116872620
Following gene: 116872622
Centisome position: 43.16
GC content: 35.63
Gene sequence:
>567_bases ATGAGATTTAAAAAAGGCGATAAAGTAGAGTTTATTTACGGAGGAACATTGACACAAGGTGTAGTTAATGAAATAAGAGC AACTAATCATAATATATCCTATCAAATTGTATATTTCGGAAGTGAAAAGAAAATTTGGTTTGCTGAACGCGAATTACTTT CTCCGGCTCCAGTTTTAAAAGTTCCGCAATGCGTAGCTGATTGGTATGAAAAGTATAAATGCGCTTTAGAGTACAGTATC TGGAAATACATTAGGAATTGGGACTATCACGAAGAAGATGGATTTTTTAATTTCATGAATGATAACGACAATGAATCTAT TAAAACGCTTATCAAAATGCAAAACGGATACGAAGTTGAGAAAGAACCGCTTTATTGGGTACAACTTATCGAAGGGGCAT CTGGCTATCTCAATGTACGAAATGACGGGATTCAGTTTATAAATAGTAGTGGTCAAACTGCTGAGCTTAAAACACGATTC ACAGAAAAAGAAATAAAAGCAATGGATAAAGGTGACGCTTATTGGCAGTTTGCTGTTCCTGTTGAGGATTTGGAGGGTGA AGCATGA
Upstream 100 bases:
>100_bases TATAGAAGGGAATCAAAAAACGAGATGAATGGTTGGCGAAAAGAAGCAGATGCGACCTATTCGCATTATATTAACTCTAA AAAATCAAGGAGGAACAAGC
Downstream 100 bases:
>100_bases GAGCGATTGGATTTAGAGCGTTTGTGAAAGAAACTAAGAAAATGCTTCCAGTCACGGATTTGTGCTTTAACGAAACAGAA GCTGTAGGTGTGAGCGGTTG
Product: phage protein, putative
Products: NA
Alternate protein names: Gp35 Protein
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRFKKGDKVEFIYGGTLTQGVVNEIRATNHNISYQIVYFGSEKKIWFAERELLSPAPVLKVPQCVADWYEKYKCALEYSI WKYIRNWDYHEEDGFFNFMNDNDNESIKTLIKMQNGYEVEKEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRF TEKEIKAMDKGDAYWQFAVPVEDLEGEA
Sequences:
>Translated_188_residues MRFKKGDKVEFIYGGTLTQGVVNEIRATNHNISYQIVYFGSEKKIWFAERELLSPAPVLKVPQCVADWYEKYKCALEYSI WKYIRNWDYHEEDGFFNFMNDNDNESIKTLIKMQNGYEVEKEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRF TEKEIKAMDKGDAYWQFAVPVEDLEGEA >Mature_188_residues MRFKKGDKVEFIYGGTLTQGVVNEIRATNHNISYQIVYFGSEKKIWFAERELLSPAPVLKVPQCVADWYEKYKCALEYSI WKYIRNWDYHEEDGFFNFMNDNDNESIKTLIKMQNGYEVEKEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRF TEKEIKAMDKGDAYWQFAVPVEDLEGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22005; Mature: 22005
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKKGDKVEFIYGGTLTQGVVNEIRATNHNISYQIVYFGSEKKIWFAERELLSPAPVLK CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCCC VPQCVADWYEKYKCALEYSIWKYIRNWDYHEEDGFFNFMNDNDNESIKTLIKMQNGYEVE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCC KEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRFTEKEIKAMDKGDAYWQFAVP CCCEEEEEEECCCCCEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECC VEDLEGEA HHHCCCCC >Mature Secondary Structure MRFKKGDKVEFIYGGTLTQGVVNEIRATNHNISYQIVYFGSEKKIWFAERELLSPAPVLK CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCCC VPQCVADWYEKYKCALEYSIWKYIRNWDYHEEDGFFNFMNDNDNESIKTLIKMQNGYEVE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCC KEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRFTEKEIKAMDKGDAYWQFAVP CCCEEEEEEECCCCCEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECC VEDLEGEA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA