| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872614
Identifier: 116872614
GI number: 116872614
Start: 1210442
End: 1210633
Strand: Direct
Name: 116872614
Synonym: lwe1198
Alternate gene names: NA
Gene position: 1210442-1210633 (Clockwise)
Preceding gene: 116872611
Following gene: 116872615
Centisome position: 43.01
GC content: 30.21
Gene sequence:
>192_bases ATGTCAGTAGAACACCAACGTTTTGCAGTTGCAGTATACGCAAAATTAAAGGCAATAAACATGAAACAATCGGATTTAGC AAAAACGTTAGATATTAGTAATGCTTACTTGTCAGATATTATAAACGGCAAAAGAAACGCATCGAAAGTTAGAAAGACAA TCATTGAAATTTTAGAACTGAATATTAATTAA
Upstream 100 bases:
>100_bases ATGGGAGCTTATTTAGCTATGTTTTGATTCTACACTAAAGTTTAATATTTGTCAACAATGTGCTAAATAATTAGCTAATA TTATAGAAAGGAGCTACAAC
Downstream 100 bases:
>100_bases TTTAGGGGTTAATAAATGAGGGAGGTATATAGAAGATGCCAAGACCACGAAAAGTAAAATCCGCCAAGATGCAATTTTTA CACGGAGTTTGGACACTAGA
Product: DNA-binding protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MSVEHQRFAVAVYAKLKAINMKQSDLAKTLDISNAYLSDIINGKRNASKVRKTIIEILELNIN
Sequences:
>Translated_63_residues MSVEHQRFAVAVYAKLKAINMKQSDLAKTLDISNAYLSDIINGKRNASKVRKTIIEILELNIN >Mature_62_residues SVEHQRFAVAVYAKLKAINMKQSDLAKTLDISNAYLSDIINGKRNASKVRKTIIEILELNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7103; Mature: 6972
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEHQRFAVAVYAKLKAINMKQSDLAKTLDISNAYLSDIINGKRNASKVRKTIIEILEL CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH NIN CCC >Mature Secondary Structure SVEHQRFAVAVYAKLKAINMKQSDLAKTLDISNAYLSDIINGKRNASKVRKTIIEILEL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH NIN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA