| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116872556
Identifier: 116872556
GI number: 116872556
Start: 1152841
End: 1153482
Strand: Direct
Name: 116872556
Synonym: lwe1140
Alternate gene names: NA
Gene position: 1152841-1153482 (Clockwise)
Preceding gene: 116872555
Following gene: 116872557
Centisome position: 40.97
GC content: 38.47
Gene sequence:
>642_bases ATGAATAATGAGTTAATAACAAGCCTTATTGAAGAAGTCACTCGCCGTGCATTACTTGAAACTGGCGTAGAAGTAGAAGC ATCCGGTCGTCACGTCCATTTAGATCGTGAAACGGTGGATGCACTTTTTGGACCTGGGTATGAACTTACTCATTTCCGTG ACCTATCTCAACCAGGTCAATATGTTTGTAAAGAAAGAATTAGTATTGTCGGACCAAAAAGCGTGATTCATAATGTAGTC ATTCTTGGGCCAATCCGTAAAAAAACACAAGTTGAAATTAGTGCGACAGATGGCACAGCACTTGGTATTAAAGCACCAGT TCGCGAAAGTGGAGATATAGCTGGCACACCTGGAATTTTACTATTATCTGCTAAAAATAGTGTTCAACTATCTGAAGGAC TTATTGTTGCAAAACGCCATATTCATATGACACCTCAAGATGCAGAAAAACAACAAGTAACACAAAGTGAAATTGTTCAA GTGAAAATTAATGGCGACAGACCACTTATTTTTGATGATGTGGTTGTTCGAATTAGCCCTGATTTTGCTACATATATGCA TATTGATTACGACGAAGCCAACGCATGCGGCTTTAAAAAGGGAATTCGAGGTCAAATAATCAAGAAAACAAAGGCAAAAT GA
Upstream 100 bases:
>100_bases ACCAGACATTATTCAAGCGCTTAATCGGTTATCCAGTTTATTTTGGATACTGATGTTCCGCGTAAGAACGGATGAATATA AAAAGTAAGGAGGCTTATTC
Downstream 100 bases:
>100_bases GTATGGAAATCGAAGCACTTATAAAAGCCGTCACCGAGGAAGTCATGAGACGATTACAACTTCCAGATAAAAAAATGATT ATCATAGGCCAAGATTCAGA
Product: propanediol utilization protein, putative
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVV ILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPQDAEKQQVTQSEIVQ VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK
Sequences:
>Translated_213_residues MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVV ILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPQDAEKQQVTQSEIVQ VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK >Mature_213_residues MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVV ILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPQDAEKQQVTQSEIVQ VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23415; Mature: 23415
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQ CCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECHHHHHHHHCCCCCCHHHHCCCCCHH YVCKERISIVGPKSVIHNVVILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGIL HHHHHHHHCCCCHHHHCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEE LLSAKNSVQLSEGLIVAKRHIHMTPQDAEKQQVTQSEIVQVKINGDRPLIFDDVVVRISP EEECCCCEEECCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCEEEEEEEEEECC DFATYMHIDYDEANACGFKKGIRGQIIKKTKAK CEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQ CCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECHHHHHHHHCCCCCCHHHHCCCCCHH YVCKERISIVGPKSVIHNVVILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGIL HHHHHHHHCCCCHHHHCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEE LLSAKNSVQLSEGLIVAKRHIHMTPQDAEKQQVTQSEIVQVKINGDRPLIFDDVVVRISP EEECCCCEEECCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCEEEEEEEEEECC DFATYMHIDYDEANACGFKKGIRGQIIKKTKAK CEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA