| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is bgxA [H]
Identifier: 116872506
GI number: 116872506
Start: 1110863
End: 1113082
Strand: Direct
Name: bgxA [H]
Synonym: lwe1090
Alternate gene names: 116872506
Gene position: 1110863-1113082 (Clockwise)
Preceding gene: 116872505
Following gene: 116872507
Centisome position: 39.47
GC content: 36.53
Gene sequence:
>2220_bases ATGAAAAAATATACAATAACTGATAAAGATACCTTTTTACTAATTGATAATGAAGATGGTGCGACATTAGGTTTGGCGAA AAATAGTGGTGTTGAAATATTGGAAGTAGACGGATATGCTTTTAAAGACCTAAATAAAAATGGAAAACTTGATCCTTATG AAGACTGGCGTTTACCTATGGAAGAACGGATTCGAAATTTAGTGTCTCTTTTACAGATAGAAGAAATTGCGGGGCTTATG CTTTACAGTGGACATCAAAGTGTAGATACAACAGGACGATTTGCACAAATGTTTGCAGGAACTTATGATGGTTTAACATT ACAAGAAAATGAACATGCAAAAATTTCTGATATTAGTGATCAACAGAAGAAATTTTTGAAAGAAGATAGATTAAGACATG TATTGTTAACAGCAGTGGAAAATACGGAAGCCGCAGTTACTTGGAACAATCATATGCAAGCTTTTGTGGAAAGTCTAGAC TGCGGGATACCAATTAATATGAGCAGTGATCCGCGACATACAAGCGATGCCAGTACTGAATTTAATGCAGGAGCGGGTGG TGATATTTCAAAGTGGCCAGAATCACTTGGTTTGGCAGCAACATTTAATCCAAAATTAGTCAAACAATTTGGTGAGATTG CTGCGAAGGAATATCGAGCACTTGGGATTACCACCGCTTTATCTCCGCAAGTAGATATTGCAACAGAACCCAGATGGATG AGATTTAAAGGAACATTTGGCGAAGATAGTGTTTTAAGTGCGGACATGGCAAAAGCTTATTGTGAAGGATTCCAAAACAG TGAAGCAGGCTGGGGAAGCGAAAGTGTAAATGCGATGGTAAAACACTGGCCGGGTGGGGGTAGTGGAGAGGCAGGGCGGG ATGCTCATTATGCTTATGGAAAATACGCAGTGTATCCAGGAAATAATTTTGAAGAACATTTAAAACCATTTGTGGATGGG GCATTTAAACTTGATAAAACTAATGCAGCTAGTGCGGTTATGCCTTACTATACCATTTCTTATAATCAGACGCCTAGCAA TGTTGGAAATGGTTTTAATCGTTATCTTATTCAAGATTTACTGCGTAATAAATATAAGTATGATGGCGTGGTTTGTACGG ACTGGAATATTACCCACGATAACTACAGTATGAGTCAATTTATTTCAGGTAAAAGTTGGGGAGTAGAAAAGTTATCCGTG GAAGAACGTCATTATTTAGCTATTTTAGCTGGTGTTGACCAATTTGGTGGAAATAATGAACTCGCTCCTGTTTTAGCAGC ATATGAAATGGGGAAAGAGGCTTTTGGAGAAAAATTTATTCGTGAACGCTTTGAACTGAGCGCACACCGTTTATTACGCA ATATATTTCAAACAGGATTATTTGAAAATCCATATTTAGATTTTAAGACCTCAGAAAAAATATGTGGAAATCCAGAATTT ATGGCAGCTGGTTTTGAAGCACAAAAGAAATCAATAGTTTTACTGAAAAATAAGCAACAAGTTTTACCTCTTACGAAGAA ACTAAAAGTATACATCCCAGAGCGCACTCGTCCGGTTACTTTTGATTGGTTTGGGAAAGAAATTGCTGCTAAGAGTGAAT TCCCAGTTGATAAGAAGATAGTAAACAAATTTTATGATTTAGTTGATAACCCAGATGAAGCAGATTTTGGTTTAGTATTT ATCGAATCACCGCAATCTGTTCCTTATACTGAGAAAGATGGCTATCTTCCTATTTCCTTACAATACCGTCCTTATCATGC AAAACTTGCTCGAGCTAAAAGTATAGCTGGTGGGGATCCACTTGAAAAAACAATCAACCGTTCCTATAAAGATAAAACCA ATACGACAACGAATGAAGCAGATTTAGATGCTGTTTTATCTACTAAAGAACAAATGGGTGAAAAACCTGTCATCGTATGT CTAGATTGTACAAATCCAACAGTTGTTGCGGAATTCGAACCTTACATTGATGGTTTATTGGTACATTTTTCATCTACAAC ACAAGCACTTTTAACATTAATTTGTGGCGAAACAGAACCAAGTGGCTTACTACCATTTCAAATGCCGTTGAATATGGATG TGGTCGAAACGCAAAAAGAAGATGTCGCACATGATATGATTCCATATATAGATGAACTAGGTAATAGCTACGATTTTGCT TATGGACTTAATTTTTCAGGTGTGATAAAAGACGAACGAGTTATTCATTATAAAATTTAA
Upstream 100 bases:
>100_bases ATAGTAAAGTTTCTGGTTTAGAGTATGAGTAAGGACAACATTTATGAATTTTACACTATAATATATTTGCAAATGAAACT AATACATAGGAGGGGTACAA
Downstream 100 bases:
>100_bases TTAATGAAGTGGAGGATATAATGGAAATAAGAATACAGAAACCTACATCAGCAGATTTTCCATTTATCGAATGGTTATGG GCAGATAAAGCGACAACAGA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MKKYTITDKDTFLLIDNEDGATLGLAKNSGVEILEVDGYAFKDLNKNGKLDPYEDWRLPMEERIRNLVSLLQIEEIAGLM LYSGHQSVDTTGRFAQMFAGTYDGLTLQENEHAKISDISDQQKKFLKEDRLRHVLLTAVENTEAAVTWNNHMQAFVESLD CGIPINMSSDPRHTSDASTEFNAGAGGDISKWPESLGLAATFNPKLVKQFGEIAAKEYRALGITTALSPQVDIATEPRWM RFKGTFGEDSVLSADMAKAYCEGFQNSEAGWGSESVNAMVKHWPGGGSGEAGRDAHYAYGKYAVYPGNNFEEHLKPFVDG AFKLDKTNAASAVMPYYTISYNQTPSNVGNGFNRYLIQDLLRNKYKYDGVVCTDWNITHDNYSMSQFISGKSWGVEKLSV EERHYLAILAGVDQFGGNNELAPVLAAYEMGKEAFGEKFIRERFELSAHRLLRNIFQTGLFENPYLDFKTSEKICGNPEF MAAGFEAQKKSIVLLKNKQQVLPLTKKLKVYIPERTRPVTFDWFGKEIAAKSEFPVDKKIVNKFYDLVDNPDEADFGLVF IESPQSVPYTEKDGYLPISLQYRPYHAKLARAKSIAGGDPLEKTINRSYKDKTNTTTNEADLDAVLSTKEQMGEKPVIVC LDCTNPTVVAEFEPYIDGLLVHFSSTTQALLTLICGETEPSGLLPFQMPLNMDVVETQKEDVAHDMIPYIDELGNSYDFA YGLNFSGVIKDERVIHYKI
Sequences:
>Translated_739_residues MKKYTITDKDTFLLIDNEDGATLGLAKNSGVEILEVDGYAFKDLNKNGKLDPYEDWRLPMEERIRNLVSLLQIEEIAGLM LYSGHQSVDTTGRFAQMFAGTYDGLTLQENEHAKISDISDQQKKFLKEDRLRHVLLTAVENTEAAVTWNNHMQAFVESLD CGIPINMSSDPRHTSDASTEFNAGAGGDISKWPESLGLAATFNPKLVKQFGEIAAKEYRALGITTALSPQVDIATEPRWM RFKGTFGEDSVLSADMAKAYCEGFQNSEAGWGSESVNAMVKHWPGGGSGEAGRDAHYAYGKYAVYPGNNFEEHLKPFVDG AFKLDKTNAASAVMPYYTISYNQTPSNVGNGFNRYLIQDLLRNKYKYDGVVCTDWNITHDNYSMSQFISGKSWGVEKLSV EERHYLAILAGVDQFGGNNELAPVLAAYEMGKEAFGEKFIRERFELSAHRLLRNIFQTGLFENPYLDFKTSEKICGNPEF MAAGFEAQKKSIVLLKNKQQVLPLTKKLKVYIPERTRPVTFDWFGKEIAAKSEFPVDKKIVNKFYDLVDNPDEADFGLVF IESPQSVPYTEKDGYLPISLQYRPYHAKLARAKSIAGGDPLEKTINRSYKDKTNTTTNEADLDAVLSTKEQMGEKPVIVC LDCTNPTVVAEFEPYIDGLLVHFSSTTQALLTLICGETEPSGLLPFQMPLNMDVVETQKEDVAHDMIPYIDELGNSYDFA YGLNFSGVIKDERVIHYKI >Mature_739_residues MKKYTITDKDTFLLIDNEDGATLGLAKNSGVEILEVDGYAFKDLNKNGKLDPYEDWRLPMEERIRNLVSLLQIEEIAGLM LYSGHQSVDTTGRFAQMFAGTYDGLTLQENEHAKISDISDQQKKFLKEDRLRHVLLTAVENTEAAVTWNNHMQAFVESLD CGIPINMSSDPRHTSDASTEFNAGAGGDISKWPESLGLAATFNPKLVKQFGEIAAKEYRALGITTALSPQVDIATEPRWM RFKGTFGEDSVLSADMAKAYCEGFQNSEAGWGSESVNAMVKHWPGGGSGEAGRDAHYAYGKYAVYPGNNFEEHLKPFVDG AFKLDKTNAASAVMPYYTISYNQTPSNVGNGFNRYLIQDLLRNKYKYDGVVCTDWNITHDNYSMSQFISGKSWGVEKLSV EERHYLAILAGVDQFGGNNELAPVLAAYEMGKEAFGEKFIRERFELSAHRLLRNIFQTGLFENPYLDFKTSEKICGNPEF MAAGFEAQKKSIVLLKNKQQVLPLTKKLKVYIPERTRPVTFDWFGKEIAAKSEFPVDKKIVNKFYDLVDNPDEADFGLVF IESPQSVPYTEKDGYLPISLQYRPYHAKLARAKSIAGGDPLEKTINRSYKDKTNTTTNEADLDAVLSTKEQMGEKPVIVC LDCTNPTVVAEFEPYIDGLLVHFSSTTQALLTLICGETEPSGLLPFQMPLNMDVVETQKEDVAHDMIPYIDELGNSYDFA YGLNFSGVIKDERVIHYKI
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=585, Percent_Identity=23.5897435897436, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 82788; Mature: 82788
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYTITDKDTFLLIDNEDGATLGLAKNSGVEILEVDGYAFKDLNKNGKLDPYEDWRLPM CCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCCCHHHCCCCH EERIRNLVSLLQIEEIAGLMLYSGHQSVDTTGRFAQMFAGTYDGLTLQENEHAKISDISD HHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH QQKKFLKEDRLRHVLLTAVENTEAAVTWNNHMQAFVESLDCGIPINMSSDPRHTSDASTE HHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FNAGAGGDISKWPESLGLAATFNPKLVKQFGEIAAKEYRALGITTALSPQVDIATEPRWM CCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCEE RFKGTFGEDSVLSADMAKAYCEGFQNSEAGWGSESVNAMVKHWPGGGSGEAGRDAHYAYG EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECC KYAVYPGNNFEEHLKPFVDGAFKLDKTNAASAVMPYYTISYNQTPSNVGNGFNRYLIQDL EEEECCCCCHHHHHHHHHCCCEEECCCCCCCEECCEEEEEECCCCHHHCCHHHHHHHHHH LRNKYKYDGVVCTDWNITHDNYSMSQFISGKSWGVEKLSVEERHYLAILAGVDQFGGNNE HHCCCCCCCEEEECCEEECCCCCHHHHHCCCCCCCEEEECCCCEEEEEEECHHHCCCCCC LAPVLAAYEMGKEAFGEKFIRERFELSAHRLLRNIFQTGLFENPYLDFKTSEKICGNPEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE MAAGFEAQKKSIVLLKNKQQVLPLTKKLKVYIPERTRPVTFDWFGKEIAAKSEFPVDKKI EECCCCCCCCEEEEEECCCHHCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCHHH VNKFYDLVDNPDEADFGLVFIESPQSVPYTEKDGYLPISLQYRPYHAKLARAKSIAGGDP HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCH LEKTINRSYKDKTNTTTNEADLDAVLSTKEQMGEKPVIVCLDCTNPTVVAEFEPYIDGLL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCEEE VHFSSTTQALLTLICGETEPSGLLPFQMPLNMDVVETQKEDVAHDMIPYIDELGNSYDFA EEECCHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEE YGLNFSGVIKDERVIHYKI ECCCCCCEECCCEEEEEEC >Mature Secondary Structure MKKYTITDKDTFLLIDNEDGATLGLAKNSGVEILEVDGYAFKDLNKNGKLDPYEDWRLPM CCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCCCHHHCCCCH EERIRNLVSLLQIEEIAGLMLYSGHQSVDTTGRFAQMFAGTYDGLTLQENEHAKISDISD HHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH QQKKFLKEDRLRHVLLTAVENTEAAVTWNNHMQAFVESLDCGIPINMSSDPRHTSDASTE HHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC FNAGAGGDISKWPESLGLAATFNPKLVKQFGEIAAKEYRALGITTALSPQVDIATEPRWM CCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCEE RFKGTFGEDSVLSADMAKAYCEGFQNSEAGWGSESVNAMVKHWPGGGSGEAGRDAHYAYG EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECC KYAVYPGNNFEEHLKPFVDGAFKLDKTNAASAVMPYYTISYNQTPSNVGNGFNRYLIQDL EEEECCCCCHHHHHHHHHCCCEEECCCCCCCEECCEEEEEECCCCHHHCCHHHHHHHHHH LRNKYKYDGVVCTDWNITHDNYSMSQFISGKSWGVEKLSVEERHYLAILAGVDQFGGNNE HHCCCCCCCEEEECCEEECCCCCHHHHHCCCCCCCEEEECCCCEEEEEEECHHHCCCCCC LAPVLAAYEMGKEAFGEKFIRERFELSAHRLLRNIFQTGLFENPYLDFKTSEKICGNPEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE MAAGFEAQKKSIVLLKNKQQVLPLTKKLKVYIPERTRPVTFDWFGKEIAAKSEFPVDKKI EECCCCCCCCEEEEEECCCHHCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCHHH VNKFYDLVDNPDEADFGLVFIESPQSVPYTEKDGYLPISLQYRPYHAKLARAKSIAGGDP HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCH LEKTINRSYKDKTNTTTNEADLDAVLSTKEQMGEKPVIVCLDCTNPTVVAEFEPYIDGLL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCEEE VHFSSTTQALLTLICGETEPSGLLPFQMPLNMDVVETQKEDVAHDMIPYIDELGNSYDFA EEECCHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEE YGLNFSGVIKDERVIHYKI ECCCCCCEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]