| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872495
Identifier: 116872495
GI number: 116872495
Start: 1099341
End: 1099784
Strand: Direct
Name: 116872495
Synonym: lwe1079
Alternate gene names: NA
Gene position: 1099341-1099784 (Clockwise)
Preceding gene: 116872494
Following gene: 116872496
Centisome position: 39.07
GC content: 29.5
Gene sequence:
>444_bases TTGGATTTTTATAAAGAAGTTGAAAAAATATTCAAAGGATACGAGCAAAAGTATCAATTAAAGCTAACTAAAATAGATAA TAATGAAGTTGCTTTCATCGGAGAGAACTATGCTTTAGGTATAGGATGGAGCATGGACGGGATTGATTTGCATTATTTCA CACTAGATAATTTGATTCTCTGTAAATTTAGTTTGGATAATTTACTGAACGCAAAGCTAACTCAAATAGAACGAGAAGGG ATAATTCCCAGTACAACAATTTACGAGAAAATAATTAATGAATTAATAATCTGCGAAAGAGGATTCAATAATCATTTTCA AGAATTACTAATGGGTGAAACATTAAGTGGCTTTGTTAATAAAGAATTTGTTTCGAATATGGAGAAGAGTATTATTGAAC GTGAACTGCATACATATAAAGAGAAACGGATTATTTCCAAATAA
Upstream 100 bases:
>100_bases TATGCTGAAAAAAATTATACTAAAGTTACTATCTTACAATTTTGCCAAGAAAGTAGAGAAATGATAGAAGATTTCTTAAA AGAATAATGACTGTGATCAA
Downstream 100 bases:
>100_bases TATCTTAATTCAAAAATTAACAAAATTGGTGGAATTAATGGGGTTTAAACACGAAGTAAAAAATAACTTTCCGAACATAA TTCAAGAATATCAATTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDFYKEVEKIFKGYEQKYQLKLTKIDNNEVAFIGENYALGIGWSMDGIDLHYFTLDNLILCKFSLDNLLNAKLTQIEREG IIPSTTIYEKIINELIICERGFNNHFQELLMGETLSGFVNKEFVSNMEKSIIERELHTYKEKRIISK
Sequences:
>Translated_147_residues MDFYKEVEKIFKGYEQKYQLKLTKIDNNEVAFIGENYALGIGWSMDGIDLHYFTLDNLILCKFSLDNLLNAKLTQIEREG IIPSTTIYEKIINELIICERGFNNHFQELLMGETLSGFVNKEFVSNMEKSIIERELHTYKEKRIISK >Mature_147_residues MDFYKEVEKIFKGYEQKYQLKLTKIDNNEVAFIGENYALGIGWSMDGIDLHYFTLDNLILCKFSLDNLLNAKLTQIEREG IIPSTTIYEKIINELIICERGFNNHFQELLMGETLSGFVNKEFVSNMEKSIIERELHTYKEKRIISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17271; Mature: 17271
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFYKEVEKIFKGYEQKYQLKLTKIDNNEVAFIGENYALGIGWSMDGIDLHYFTLDNLIL CCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCEEEEEEECCEEE CKFSLDNLLNAKLTQIEREGIIPSTTIYEKIINELIICERGFNNHFQELLMGETLSGFVN EEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KEFVSNMEKSIIERELHTYKEKRIISK HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFYKEVEKIFKGYEQKYQLKLTKIDNNEVAFIGENYALGIGWSMDGIDLHYFTLDNLIL CCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCEEEEEEECCEEE CKFSLDNLLNAKLTQIEREGIIPSTTIYEKIINELIICERGFNNHFQELLMGETLSGFVN EEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KEFVSNMEKSIIERELHTYKEKRIISK HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA