Click here to switch to the map view.

The map label for this gene is yclI [H]

Identifier: 116872458

GI number: 116872458

Start: 1054255

End: 1055676

Strand: Direct

Name: yclI [H]

Synonym: lwe1040

Alternate gene names: 116872458

Gene position: 1054255-1055676 (Clockwise)

Preceding gene: 116872457

Following gene: 116872459

Centisome position: 37.46

GC content: 33.05

Gene sequence:

>1422_bases
ATGGATTTTATCAGAAGAGCCTTTATTAGTATTAAAGCTAAAAAAGGAAAGTCCTTAGTATTATTTATTTTATTATTAGT
TATTTTTAGCTTAGTATTTACAGGTTTTGCTATTCAAGAATCAACAAAACAAAGCGCAGAATCAGCAAGAAAAGAATTAG
GTGCGAACGTCACCTTAAAAATGAATCAACAGAAAGTAATGGAAAAAGCTCAAAGCGGGGAACAAATCAATGATGCTGAT
TTATCCATTCCTAATACAGATATTGATAAAATAAAAAATTTACCACAAGTAGCCGATTATACCATTAGCTCAGATGGATC
AGCAATAAAAGGTGATTTAAAACCAATGCCTGCCAAAAAGCAAGAAAATGGTCAAGGTGGTATGGCTCAAGTTGCAGGAA
ATGATGAAAATGGAAAAAAAGTAGAAACACCAAGTTTTACAGTTAAAGCAGTAAACCAAACAGCTACACTACCAAGCTTT
CAAGATAAAACAGACAAAATCATTTCAGGTAAACAGCTAACTAAAGAGGATAAAGGAAATCAAGCTCTTATTGAAAAACA
GCTTGCAGAAAAAAACAACCTCAAAGTGGGCGATAAATTTAAACTAACCAACGATAAAAATAAAAAAATAGAATTTACAG
TAAAAGGTATTTATCAAAGTAACCAAAAATTAGAACCACAACTAGAATCATTTGAAATGATGCTTCCGGGAAACAAAATA
TACGCTAGTTTTGAAGGAGCAAAAAATTTCGTTTGGAGTAAAGGTATTGAAAAAGCGGAATTTGATTTAAAGGATCCGCA
AGAAGTAAATTCATTTATTGATGACGCAAAAAAACTAACAAAAGTGGATGATGAAGATTTATTCCAATTCGATGCTCAAA
ATAGTGCTTATGAAAAAATGATTGGACCGATTGAACGAGTAGCTGCTTTTAGTAATATTATAGTTACCATTACACTAATT
GCAGGTGGATTAATTCTTGCATTAATCGTCTTATTATCTATTCGAGAACGTAAATTTGAAATGGGTGTACTCTTATCATT
AGGTGAAAATAAAGCGAAGTTAATGGGACAGTTTTTAGTCGAAGTAGTTATTATTGCCGCACTAGCGTTCTCCCTCTCTT
GTGCACTTGCTAACCCAGTGGGACAAGTAATTTCGAACCAAATGCTTTCTAGTGAAGTAAGCAAAGAATCAAGTAGTGAT
GATGAACCATCTGAACAACAAAATATGGCATTAGCATTAGGCGGAGAACAAGAAAAAGTAGTGGATGCAGATCCGATTGA
TAAAATTAATGTTTCTATTACTGCTGATACAATGGGACGCGTTGGTGGCCTTGGATTTATATTGATTTTCCTTGCTACGA
CGATACCATGCTTATTTATCATTCGACTACAACCTAAAATGCTATTTACTCAGAAAGATTAA

Upstream 100 bases:

>100_bases
AAATGTGGCGATAAAAAATACAGCTAAAAAACAGATAGAGTTCATATGAACTCTATCTGTTTTTTGTATGCTTACTATAT
TAAGAAACGGAGGTTAGAAA

Downstream 100 bases:

>100_bases
GGAGAGGCTTAGATGGAAACTAATTTAGAATTAAAAGACATTACTTATCAATATGATTCAGGAAATAAAGCTCAAATCGT
ACTAAAAAACCTTTCTTATA

Product: ABC transporters (permease protein), putattive

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MDFIRRAFISIKAKKGKSLVLFILLLVIFSLVFTGFAIQESTKQSAESARKELGANVTLKMNQQKVMEKAQSGEQINDAD
LSIPNTDIDKIKNLPQVADYTISSDGSAIKGDLKPMPAKKQENGQGGMAQVAGNDENGKKVETPSFTVKAVNQTATLPSF
QDKTDKIISGKQLTKEDKGNQALIEKQLAEKNNLKVGDKFKLTNDKNKKIEFTVKGIYQSNQKLEPQLESFEMMLPGNKI
YASFEGAKNFVWSKGIEKAEFDLKDPQEVNSFIDDAKKLTKVDDEDLFQFDAQNSAYEKMIGPIERVAAFSNIIVTITLI
AGGLILALIVLLSIRERKFEMGVLLSLGENKAKLMGQFLVEVVIIAALAFSLSCALANPVGQVISNQMLSSEVSKESSSD
DEPSEQQNMALALGGEQEKVVDADPIDKINVSITADTMGRVGGLGFILIFLATTIPCLFIIRLQPKMLFTQKD

Sequences:

>Translated_473_residues
MDFIRRAFISIKAKKGKSLVLFILLLVIFSLVFTGFAIQESTKQSAESARKELGANVTLKMNQQKVMEKAQSGEQINDAD
LSIPNTDIDKIKNLPQVADYTISSDGSAIKGDLKPMPAKKQENGQGGMAQVAGNDENGKKVETPSFTVKAVNQTATLPSF
QDKTDKIISGKQLTKEDKGNQALIEKQLAEKNNLKVGDKFKLTNDKNKKIEFTVKGIYQSNQKLEPQLESFEMMLPGNKI
YASFEGAKNFVWSKGIEKAEFDLKDPQEVNSFIDDAKKLTKVDDEDLFQFDAQNSAYEKMIGPIERVAAFSNIIVTITLI
AGGLILALIVLLSIRERKFEMGVLLSLGENKAKLMGQFLVEVVIIAALAFSLSCALANPVGQVISNQMLSSEVSKESSSD
DEPSEQQNMALALGGEQEKVVDADPIDKINVSITADTMGRVGGLGFILIFLATTIPCLFIIRLQPKMLFTQKD
>Mature_473_residues
MDFIRRAFISIKAKKGKSLVLFILLLVIFSLVFTGFAIQESTKQSAESARKELGANVTLKMNQQKVMEKAQSGEQINDAD
LSIPNTDIDKIKNLPQVADYTISSDGSAIKGDLKPMPAKKQENGQGGMAQVAGNDENGKKVETPSFTVKAVNQTATLPSF
QDKTDKIISGKQLTKEDKGNQALIEKQLAEKNNLKVGDKFKLTNDKNKKIEFTVKGIYQSNQKLEPQLESFEMMLPGNKI
YASFEGAKNFVWSKGIEKAEFDLKDPQEVNSFIDDAKKLTKVDDEDLFQFDAQNSAYEKMIGPIERVAAFSNIIVTITLI
AGGLILALIVLLSIRERKFEMGVLLSLGENKAKLMGQFLVEVVIIAALAFSLSCALANPVGQVISNQMLSSEVSKESSSD
DEPSEQQNMALALGGEQEKVVDADPIDKINVSITADTMGRVGGLGFILIFLATTIPCLFIIRLQPKMLFTQKD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 51893; Mature: 51893

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFIRRAFISIKAKKGKSLVLFILLLVIFSLVFTGFAIQESTKQSAESARKELGANVTLK
CCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEE
MNQQKVMEKAQSGEQINDADLSIPNTDIDKIKNLPQVADYTISSDGSAIKGDLKPMPAKK
ECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHCEEECCCCCEEECCCCCCCCCC
QENGQGGMAQVAGNDENGKKVETPSFTVKAVNQTATLPSFQDKTDKIISGKQLTKEDKGN
CCCCCCCEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHCCCCCCC
QALIEKQLAEKNNLKVGDKFKLTNDKNKKIEFTVKGIYQSNQKLEPQLESFEMMLPGNKI
HHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHHEECCCCEE
YASFEGAKNFVWSKGIEKAEFDLKDPQEVNSFIDDAKKLTKVDDEDLFQFDAQNSAYEKM
EEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH
IGPIERVAAFSNIIVTITLIAGGLILALIVLLSIRERKFEMGVLLSLGENKAKLMGQFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHH
EVVIIAALAFSLSCALANPVGQVISNQMLSSEVSKESSSDDEPSEQQNMALALGGEQEKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCCC
VDADPIDKINVSITADTMGRVGGLGFILIFLATTIPCLFIIRLQPKMLFTQKD
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCC
>Mature Secondary Structure
MDFIRRAFISIKAKKGKSLVLFILLLVIFSLVFTGFAIQESTKQSAESARKELGANVTLK
CCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEE
MNQQKVMEKAQSGEQINDADLSIPNTDIDKIKNLPQVADYTISSDGSAIKGDLKPMPAKK
ECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHCEEECCCCCEEECCCCCCCCCC
QENGQGGMAQVAGNDENGKKVETPSFTVKAVNQTATLPSFQDKTDKIISGKQLTKEDKGN
CCCCCCCEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHCCCCCCC
QALIEKQLAEKNNLKVGDKFKLTNDKNKKIEFTVKGIYQSNQKLEPQLESFEMMLPGNKI
HHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHHEECCCCEE
YASFEGAKNFVWSKGIEKAEFDLKDPQEVNSFIDDAKKLTKVDDEDLFQFDAQNSAYEKM
EEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH
IGPIERVAAFSNIIVTITLIAGGLILALIVLLSIRERKFEMGVLLSLGENKAKLMGQFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHH
EVVIIAALAFSLSCALANPVGQVISNQMLSSEVSKESSSDDEPSEQQNMALALGGEQEKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCCC
VDADPIDKINVSITADTMGRVGGLGFILIFLATTIPCLFIIRLQPKMLFTQKD
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]