| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872195
Identifier: 116872195
GI number: 116872195
Start: 805141
End: 805626
Strand: Direct
Name: 116872195
Synonym: lwe0775
Alternate gene names: NA
Gene position: 805141-805626 (Clockwise)
Preceding gene: 116872194
Following gene: 116872196
Centisome position: 28.61
GC content: 35.6
Gene sequence:
>486_bases ATGATTGAGTTATATATTGAAAACCCTAAAGCACGTAAAGGGCGTTGGTTTGAGCTACCTATTCTGTGGGAAGTTGTACA AGAAAAGTTAGAATTAGAAGATGAAAAAGTATATGAAATCAACGACTACTCAGCGCCTATTAAGTTGTCTAATTTTGAAG ATTTTGATTACATGAATGAAGTGGCTGAACAATTTGATGAACATGAGGGACATGAAGCGATTAAGTATCTGGAGGAAGTA ATTACTGCTGGCTTTTTCAATGATCTGTTAGATGCTTTTGAACAGATTGATGAAATTCAAGTCTACTCGAATTGTTATTC CTACAAAGATTATGCTGAACAAATAATGGATGATCTTGGCTATCTCTCTGGCGTACCAGATATTATCAAATGGAATATTG ACTATGAAGGGATTGGAGAAGATTTACGTCAAGATGGCAGGCTCTATCAAGCAAGTGACAACACCATTATTGAGGTTATG ACATGA
Upstream 100 bases:
>100_bases AGAAGAGGAAGAAGCAGTATCCTCTAAAACTGTATCTGTTACGCAACAAGAAGTGGAGCAGCTGTTAGCCCAATTTTTAT TTGAGTGAGAGGTGAATGAA
Downstream 100 bases:
>100_bases ACCAGAAACAATTAGCAGAGAAATTGAAGTACTATGGATTTATTTGCTTGGAAGGGGAAATCCCTGAGCGACAAGCCAGA CAATTTCTTACCGTTAAGAA
Product: antirestriction protein, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIELYIENPKARKGRWFELPILWEVVQEKLELEDEKVYEINDYSAPIKLSNFEDFDYMNEVAEQFDEHEGHEAIKYLEEV ITAGFFNDLLDAFEQIDEIQVYSNCYSYKDYAEQIMDDLGYLSGVPDIIKWNIDYEGIGEDLRQDGRLYQASDNTIIEVM T
Sequences:
>Translated_161_residues MIELYIENPKARKGRWFELPILWEVVQEKLELEDEKVYEINDYSAPIKLSNFEDFDYMNEVAEQFDEHEGHEAIKYLEEV ITAGFFNDLLDAFEQIDEIQVYSNCYSYKDYAEQIMDDLGYLSGVPDIIKWNIDYEGIGEDLRQDGRLYQASDNTIIEVM T >Mature_161_residues MIELYIENPKARKGRWFELPILWEVVQEKLELEDEKVYEINDYSAPIKLSNFEDFDYMNEVAEQFDEHEGHEAIKYLEEV ITAGFFNDLLDAFEQIDEIQVYSNCYSYKDYAEQIMDDLGYLSGVPDIIKWNIDYEGIGEDLRQDGRLYQASDNTIIEVM T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19052; Mature: 19052
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELYIENPKARKGRWFELPILWEVVQEKLELEDEKVYEINDYSAPIKLSNFEDFDYMNE CEEEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHH VAEQFDEHEGHEAIKYLEEVITAGFFNDLLDAFEQIDEIQVYSNCYSYKDYAEQIMDDLG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLSGVPDIIKWNIDYEGIGEDLRQDGRLYQASDNTIIEVMT HHCCCCHHEEECCCHHHCCHHHHHCCCEEECCCCEEEEEEC >Mature Secondary Structure MIELYIENPKARKGRWFELPILWEVVQEKLELEDEKVYEINDYSAPIKLSNFEDFDYMNE CEEEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHH VAEQFDEHEGHEAIKYLEEVITAGFFNDLLDAFEQIDEIQVYSNCYSYKDYAEQIMDDLG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLSGVPDIIKWNIDYEGIGEDLRQDGRLYQASDNTIIEVMT HHCCCCHHEEECCCHHHCCHHHHHCCCEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA