| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872189
Identifier: 116872189
GI number: 116872189
Start: 798098
End: 798505
Strand: Direct
Name: 116872189
Synonym: lwe0769
Alternate gene names: NA
Gene position: 798098-798505 (Clockwise)
Preceding gene: 116872188
Following gene: 116872190
Centisome position: 28.36
GC content: 35.29
Gene sequence:
>408_bases ATGAGTTTAAAATTTGAAGAAAATACGATTAAAGACTTTGATGTCAAGAAAACATTTGGAACCTGTTATTACTTAAGCGC TCAGTCTATCTATGAAAACGATAGCGAAGGGAACCGAACAGAAATAGTAAGAGAGCAACGTGTAACAATCTATTCCGAAG TAAAAAATGATCAAATTGATATTACATTGCCAGAAACAACGGATTTAGCTTCATTTTCTTATGATGATGAAATTGAACTG ACAGGTGAAGTGACTGCTTTAGCGTGGCTCTCTTCCTATGCTGGGTATAATGATTCCATTCAATCAGAACAAGCTTTTAA AATTCGAGCTGGTGGAATTAAAAAGGTAACAACACCACATCAGAAACCTGAAAAGCAAAAGTCTACTGGAACTTTACAAG GGGAGTAA
Upstream 100 bases:
>100_bases AGTGCTAAACGAAACAACATTGGAACAGCTAGCCGGACGTTAGAATTACAAGTATTTGCTAAGCAATTAATTACACTAAA CTAGAAAAGAGGATAAATAA
Downstream 100 bases:
>100_bases CGGATGAAATTTATAAACTACAGGGGCACCAGAATCCGTCCGTATCACTTGAATGTCTATCGTCATTACTTGTTTGGTAT GTGGTCTCCAGCACTCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSLKFEENTIKDFDVKKTFGTCYYLSAQSIYENDSEGNRTEIVREQRVTIYSEVKNDQIDITLPETTDLASFSYDDEIEL TGEVTALAWLSSYAGYNDSIQSEQAFKIRAGGIKKVTTPHQKPEKQKSTGTLQGE
Sequences:
>Translated_135_residues MSLKFEENTIKDFDVKKTFGTCYYLSAQSIYENDSEGNRTEIVREQRVTIYSEVKNDQIDITLPETTDLASFSYDDEIEL TGEVTALAWLSSYAGYNDSIQSEQAFKIRAGGIKKVTTPHQKPEKQKSTGTLQGE >Mature_134_residues SLKFEENTIKDFDVKKTFGTCYYLSAQSIYENDSEGNRTEIVREQRVTIYSEVKNDQIDITLPETTDLASFSYDDEIELT GEVTALAWLSSYAGYNDSIQSEQAFKIRAGGIKKVTTPHQKPEKQKSTGTLQGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15265; Mature: 15134
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKFEENTIKDFDVKKTFGTCYYLSAQSIYENDSEGNRTEIVREQRVTIYSEVKNDQID CCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHEEEEECCCCCEEE ITLPETTDLASFSYDDEIELTGEVTALAWLSSYAGYNDSIQSEQAFKIRAGGIKKVTTPH EECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCC QKPEKQKSTGTLQGE CCCCCCCCCCCCCCC >Mature Secondary Structure SLKFEENTIKDFDVKKTFGTCYYLSAQSIYENDSEGNRTEIVREQRVTIYSEVKNDQID CCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHEEEEECCCCCEEE ITLPETTDLASFSYDDEIELTGEVTALAWLSSYAGYNDSIQSEQAFKIRAGGIKKVTTPH EECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCC QKPEKQKSTGTLQGE CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA