| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is inlA [H]
Identifier: 116872179
GI number: 116872179
Start: 785254
End: 787194
Strand: Direct
Name: inlA [H]
Synonym: lwe0759
Alternate gene names: 116872179
Gene position: 785254-787194 (Clockwise)
Preceding gene: 116872178
Following gene: 116872180
Centisome position: 27.9
GC content: 32.15
Gene sequence:
>1941_bases ATGAAACAACTAGGTTTTTTAATATTAATGATGACTTTACTATTAAGTGGATTTATTCCAAATGTACATGCAAAGACAGA GGGACCGCAAGCAGCTAATAATTTACAAGTAGCACCACCAGCTGCAATTAAAGATATTTTTCCAGATCCTGCTATGGCGA ATGAAGTTTTAAAAGACTTGAATCTTAATAAATTAAATAAACAAAGCACCATCGATACGGTGACTCAAACCGAATTAAAT AGTATTACTGGATCTTTTCAAGCAATTAATAAAGGAATTAAATCAATAGAGGGTGCGGAATATCTGCAAAATATAACTGA ACTAGATGTGGAGAAAAACCAAATAACAGATATAACACCAGTTGCAAATCTCAAGAAATTGACCACATTGTTAATTAATA GTAATCAAATAAAAGATATATCACCAGTGGCTGATTTAGCTAATTTAACTACTTTCTACTGTGGGAATAATCCTATTAGC GATATTAGTGCAGTTCAAAATCTCACTAAATTATCTATTTTTAATTGTTACACAGCTAACGTAGAAAATATAAGTCCTGT CAAGAATCTTATTAATCTAAAAACATTAAGTTTAGGAAGTAATAACATACATGATATTAGTGATATAGAAAAATTAACTG CTCTCGAATATCTTAGTTTTAGTAATAATCCAGTAGAAAATCCAGAAGTTATTGGTAATTTAATAAACTTAAATACATTG TGGTTATATAATGCGCAGATTAAAAATATTGATTTCACAGCAAGTTTACCTAGTTTAACAAGTGTTTATTTATATAACAA TCAAATTAGTGACATTAGCGAAGTAAGCAATTGGAGAAATATCGAGTATTTAGAACTAAATGGTAATCAGATATCAGATA TAACGCCAATAGCCAATCTAACTACTCTTAAAACACTAAAGTTACAGGATCAAAAAATTACCAATCCTGAAATACCTTTC CAAAAAAATGTTTCCATTGAAAATAAAGTAATAGATAATTTTGGAAATATAGTAGCACCAAATAATATTAGTGATAATGG GATGTATAATAGCCCTACTTTATCATGGGATTTAAACGAAATAAAAGACAGTCTCTCTTATGACTTTTCAACAAAAATGA CAATTTTAAAAATAAATGCTACTTTTTCAGGAACAGTGATTCAGCCATTAATAAAAGATAGCACTCGACCTGTCATTACA GCAGATGAAAAAATTAGTTATCCCGAACGAACAATAAAAACAGCAGCCGAATTTTTAACCGATATTCATGCGACAACAGA TGACGGCAGTCCAGTCGAGGTGGATTTAAGTGCGGTAGATTTTGATAAGCCAGGAAGTTATACAGTGACTTTAACAGCGG TAGATTCGGCAGGGAACGTGGCAACTCCAGTAAATGTTATTATTACTATTACAGCGGTAGATATGAGCAAACCTGTCATT ACAGCAGATGAAAAAATTAGTTATCCCGAACGAACAATAAAAACAGCAGCCGAATTTTTAACCGATATTCATGCGACAAC AGATGACGGCAGTCCAGTCGAGGTGGATTTAAGTGCGGTAGATTTTGATAAGCCCGGAAGTTATACAGTGACTTTAACAG CGGTGGATTCGGCGGGAAACGTGGCAACTCCAGTTCAAGTAACAATTATTATTACTAGTTCAGAAAAAATAGATCCGGTT ATTCCAGTTGTCCCCGAAGAAAGAGATATAAAACCAGAAGAGCCAAAGAAAATAACTATTCTTCCAAAAGATCAGGAAAT GCTTATAACAATTATTCCAAAAGAAAATATCGAAAAATTAAGTTCAATCAGTGATACCAAAGTAACAGAAAAGAAGGAAG TAAAGAATAAAACTCTTCCGAAAACTGGTGACCAATTACCTTTTACAGCATTTTGGGGATTGCTTATTATCTCAGCAAGT ATTTCTTATTTTCGTAAATAA
Upstream 100 bases:
>100_bases TTGTCATACTTTAGCAGTTGAATTTACTAATTTGGGAAAATAACTTTCGCTTAAATATGTATTATTAGTATAGATGGAAA AACATGAAGGAGTTAATTGA
Downstream 100 bases:
>100_bases CCATTTTTGCCTAGGATAAATTCGTATTCTAGGCTTTTTTATGAAAATTGCATTAGAATGTGGTGAAACTTTAGACATAT AGTTACACTGGCTTCGGTTT
Product: internalin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MKQLGFLILMMTLLLSGFIPNVHAKTEGPQAANNLQVAPPAAIKDIFPDPAMANEVLKDLNLNKLNKQSTIDTVTQTELN SITGSFQAINKGIKSIEGAEYLQNITELDVEKNQITDITPVANLKKLTTLLINSNQIKDISPVADLANLTTFYCGNNPIS DISAVQNLTKLSIFNCYTANVENISPVKNLINLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLINLNTL WLYNAQIKNIDFTASLPSLTSVYLYNNQISDISEVSNWRNIEYLELNGNQISDITPIANLTTLKTLKLQDQKITNPEIPF QKNVSIENKVIDNFGNIVAPNNISDNGMYNSPTLSWDLNEIKDSLSYDFSTKMTILKINATFSGTVIQPLIKDSTRPVIT ADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVNVIITITAVDMSKPVI TADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVQVTIIITSSEKIDPV IPVVPEERDIKPEEPKKITILPKDQEMLITIIPKENIEKLSSISDTKVTEKKEVKNKTLPKTGDQLPFTAFWGLLIISAS ISYFRK
Sequences:
>Translated_646_residues MKQLGFLILMMTLLLSGFIPNVHAKTEGPQAANNLQVAPPAAIKDIFPDPAMANEVLKDLNLNKLNKQSTIDTVTQTELN SITGSFQAINKGIKSIEGAEYLQNITELDVEKNQITDITPVANLKKLTTLLINSNQIKDISPVADLANLTTFYCGNNPIS DISAVQNLTKLSIFNCYTANVENISPVKNLINLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLINLNTL WLYNAQIKNIDFTASLPSLTSVYLYNNQISDISEVSNWRNIEYLELNGNQISDITPIANLTTLKTLKLQDQKITNPEIPF QKNVSIENKVIDNFGNIVAPNNISDNGMYNSPTLSWDLNEIKDSLSYDFSTKMTILKINATFSGTVIQPLIKDSTRPVIT ADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVNVIITITAVDMSKPVI TADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVQVTIIITSSEKIDPV IPVVPEERDIKPEEPKKITILPKDQEMLITIIPKENIEKLSSISDTKVTEKKEVKNKTLPKTGDQLPFTAFWGLLIISAS ISYFRK >Mature_646_residues MKQLGFLILMMTLLLSGFIPNVHAKTEGPQAANNLQVAPPAAIKDIFPDPAMANEVLKDLNLNKLNKQSTIDTVTQTELN SITGSFQAINKGIKSIEGAEYLQNITELDVEKNQITDITPVANLKKLTTLLINSNQIKDISPVADLANLTTFYCGNNPIS DISAVQNLTKLSIFNCYTANVENISPVKNLINLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLINLNTL WLYNAQIKNIDFTASLPSLTSVYLYNNQISDISEVSNWRNIEYLELNGNQISDITPIANLTTLKTLKLQDQKITNPEIPF QKNVSIENKVIDNFGNIVAPNNISDNGMYNSPTLSWDLNEIKDSLSYDFSTKMTILKINATFSGTVIQPLIKDSTRPVIT ADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVNVIITITAVDMSKPVI TADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVQVTIIITSSEKIDPV IPVVPEERDIKPEEPKKITILPKDQEMLITIIPKENIEKLSSISDTKVTEKKEVKNKTLPKTGDQLPFTAFWGLLIISAS ISYFRK
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI4506013, Length=242, Percent_Identity=30.1652892561983, Blast_Score=93, Evalue=8e-19, Organism=Homo sapiens, GI55743114, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI206725447, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI42542396, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17536161, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17554124, Length=248, Percent_Identity=23.7903225806452, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17531555, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI21358617, Length=280, Percent_Identity=26.4285714285714, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 70852; Mature: 70852
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLGFLILMMTLLLSGFIPNVHAKTEGPQAANNLQVAPPAAIKDIFPDPAMANEVLKDL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHC NLNKLNKQSTIDTVTQTELNSITGSFQAINKGIKSIEGAEYLQNITELDVEKNQITDITP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC VANLKKLTTLLINSNQIKDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTAN HHHHHHHHHEEECCCCCCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHEEEEEEEECC VENISPVKNLINLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLINLNTL CCCCHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEE WLYNAQIKNIDFTASLPSLTSVYLYNNQISDISEVSNWRNIEYLELNGNQISDITPIANL EEEECEEECEEEEECCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC TTLKTLKLQDQKITNPEIPFQKNVSIENKVIDNFGNIVAPNNISDNGMYNSPTLSWDLNE EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEHHH IKDSLSYDFSTKMTILKINATFSGTVIQPLIKDSTRPVITADEKISYPERTIKTAAEFLT HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH DIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVNVIITITAVDMSKPVI HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEE TADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGN ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCC VATPVQVTIIITSSEKIDPVIPVVPEERDIKPEEPKKITILPKDQEMLITIIPKENIEKL CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHH SSISDTKVTEKKEVKNKTLPKTGDQLPFTAFWGLLIISASISYFRK HCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQLGFLILMMTLLLSGFIPNVHAKTEGPQAANNLQVAPPAAIKDIFPDPAMANEVLKDL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHC NLNKLNKQSTIDTVTQTELNSITGSFQAINKGIKSIEGAEYLQNITELDVEKNQITDITP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC VANLKKLTTLLINSNQIKDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTAN HHHHHHHHHEEECCCCCCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHEEEEEEEECC VENISPVKNLINLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLINLNTL CCCCHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEE WLYNAQIKNIDFTASLPSLTSVYLYNNQISDISEVSNWRNIEYLELNGNQISDITPIANL EEEECEEECEEEEECCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC TTLKTLKLQDQKITNPEIPFQKNVSIENKVIDNFGNIVAPNNISDNGMYNSPTLSWDLNE EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEHHH IKDSLSYDFSTKMTILKINATFSGTVIQPLIKDSTRPVITADEKISYPERTIKTAAEFLT HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH DIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGNVATPVNVIITITAVDMSKPVI HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEE TADEKISYPERTIKTAAEFLTDIHATTDDGSPVEVDLSAVDFDKPGSYTVTLTAVDSAGN ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCC VATPVQVTIIITSSEKIDPVIPVVPEERDIKPEEPKKITILPKDQEMLITIIPKENIEKL CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHH SSISDTKVTEKKEVKNKTLPKTGDQLPFTAFWGLLIISASISYFRK HCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]