| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872152
Identifier: 116872152
GI number: 116872152
Start: 756724
End: 757476
Strand: Direct
Name: 116872152
Synonym: lwe0732
Alternate gene names: NA
Gene position: 756724-757476 (Clockwise)
Preceding gene: 116872150
Following gene: 116872153
Centisome position: 26.89
GC content: 33.07
Gene sequence:
>753_bases ATGGCGATCAAAAAATTAAATGACTTTTATTTTAAAAAATTAGGGAACTGGAATTTAGTGCATAGCTTTTTGAAAGGCTT TTGGCGAGCGTTTATTTTCATGCTGCTACTGCTAATTATTGTGGATGTAGTTGTTATACAATTTGTGAATGGTCGTTATT TTATTCCAGTTATTTTACTAAGTTTATTGTGTATTCCTCTTTTTTACTACATCTTGATATACAGCCGTGCGAAGAAATTC ATCCGTACACGTTATCAACTACGGAATTTTACTGAACTAACAACGATGCGTCGCTATTTATTATATGCCTATTTAGAAAA AAGTGGTTTTAGTACGCGAGATGATTTAGAAAAGTTGATTCGTTTTATTCATTCTGAAATGGCAGAAGAAAAGAAAAGTT ATCAACCACTTAGTACTATAGCGGGTGTTTTTATAGCGGCATTTTTGGCCATCTTAGGAGGCTCCTTTCTATTCTTGATG GATGATATAGTGGAGCGCCTTATTGCTGCAGTTCTAATGATAATTATGGCAATTTTACTTTATGTTATTGGCACTTTTAT TATGTCGATTATTCGCTCGAAGTCAGAAACAAATACAAAAAAAGAACGGGAATTAACAAAAGAAATTATCGCTATTCAGA CGGCAATACTTGTCAGCGAAAATACTAGTTACCATCCATTTTTAGCGATGGAGCGAAAAGTAGCTGAAAACGATTTTCTG AAAGAAATTATTACGGCAAAATCCTTTTTATAA
Upstream 100 bases:
>100_bases AAACTAATTACGATAAAAAAGTGAAATTCTCTTTACAAACTTTAATAAATAGATGACTCATGGTAAACTTGAATTTAGGA AAAAAGGAAAAGGTGTAGAA
Downstream 100 bases:
>100_bases ACATATTTTTTAGACATATTTAGGAGGGAATTTAATGACAATCAAACGCAAAGAGACGAGAGAAAGTGTTTGTTATCGTG AAATTAAAAAGAAGATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAIKKLNDFYFKKLGNWNLVHSFLKGFWRAFIFMLLLLIIVDVVVIQFVNGRYFIPVILLSLLCIPLFYYILIYSRAKKF IRTRYQLRNFTELTTMRRYLLYAYLEKSGFSTRDDLEKLIRFIHSEMAEEKKSYQPLSTIAGVFIAAFLAILGGSFLFLM DDIVERLIAAVLMIIMAILLYVIGTFIMSIIRSKSETNTKKERELTKEIIAIQTAILVSENTSYHPFLAMERKVAENDFL KEIITAKSFL
Sequences:
>Translated_250_residues MAIKKLNDFYFKKLGNWNLVHSFLKGFWRAFIFMLLLLIIVDVVVIQFVNGRYFIPVILLSLLCIPLFYYILIYSRAKKF IRTRYQLRNFTELTTMRRYLLYAYLEKSGFSTRDDLEKLIRFIHSEMAEEKKSYQPLSTIAGVFIAAFLAILGGSFLFLM DDIVERLIAAVLMIIMAILLYVIGTFIMSIIRSKSETNTKKERELTKEIIAIQTAILVSENTSYHPFLAMERKVAENDFL KEIITAKSFL >Mature_249_residues AIKKLNDFYFKKLGNWNLVHSFLKGFWRAFIFMLLLLIIVDVVVIQFVNGRYFIPVILLSLLCIPLFYYILIYSRAKKFI RTRYQLRNFTELTTMRRYLLYAYLEKSGFSTRDDLEKLIRFIHSEMAEEKKSYQPLSTIAGVFIAAFLAILGGSFLFLMD DIVERLIAAVLMIIMAILLYVIGTFIMSIIRSKSETNTKKERELTKEIIAIQTAILVSENTSYHPFLAMERKVAENDFLK EIITAKSFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29228; Mature: 29096
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKKLNDFYFKKLGNWNLVHSFLKGFWRAFIFMLLLLIIVDVVVIQFVNGRYFIPVILL CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SLLCIPLFYYILIYSRAKKFIRTRYQLRNFTELTTMRRYLLYAYLEKSGFSTRDDLEKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RFIHSEMAEEKKSYQPLSTIAGVFIAAFLAILGGSFLFLMDDIVERLIAAVLMIIMAILL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YVIGTFIMSIIRSKSETNTKKERELTKEIIAIQTAILVSENTSYHPFLAMERKVAENDFL HHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH KEIITAKSFL HHHHHHHCCC >Mature Secondary Structure AIKKLNDFYFKKLGNWNLVHSFLKGFWRAFIFMLLLLIIVDVVVIQFVNGRYFIPVILL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SLLCIPLFYYILIYSRAKKFIRTRYQLRNFTELTTMRRYLLYAYLEKSGFSTRDDLEKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RFIHSEMAEEKKSYQPLSTIAGVFIAAFLAILGGSFLFLMDDIVERLIAAVLMIIMAILL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YVIGTFIMSIIRSKSETNTKKERELTKEIIAIQTAILVSENTSYHPFLAMERKVAENDFL HHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH KEIITAKSFL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA