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The map label for this gene is ugpB [C]

Identifier: 116872149

GI number: 116872149

Start: 753148

End: 754401

Strand: Direct

Name: ugpB [C]

Synonym: lwe0729

Alternate gene names: 116872149

Gene position: 753148-754401 (Clockwise)

Preceding gene: 116872148

Following gene: 116872150

Centisome position: 26.76

GC content: 35.25

Gene sequence:

>1254_bases
ATGAAAAAAGTATTATTAGCAATTCTTAGTATGGTATTGTTGCTTAGTTTAGCAGCTTGTGGTGGAGGTTCAGACAGTGG
GAAGGACAAGGACGGTAAAGAAGAAATTGTTATGTGGGGCTCCTGGTCAGGGGATCAAATTAAACAGTTAGAAAAACAAA
TCGATAGTTATAATAAGTCACAAGATAAATATAAAGTAAAATATGTGATGCAAGAAAATGTGGAAGAAAAATTACTAACA
GGAATAGCAGGTGGTGAACTTCCTGATATTATCATGTGGGATCGCTATCAAACAGCTCTTTATGCTCCAAAAGGCGTGCT
TGAACCTCTAGATAAACTAGTTAAAGAAGATAAAGTGAAGATGGATGATTTTTATGAAGAATCAGTGAAAGAAATGACTT
ATAGTGATAAATTATATGGTTTACCACTATTAAATGATAATCGAATTCTATTTTATAATAAAAAATTATTACAAGAAGCT
GGCGTAAAACCTCCAACTACTTGGGATGAATTAGCAACTGCTGCACAGAAAACAACGAAGTGGGATGGAAGTAAAATGAC
ACAAGCAGGAATGTCACTTCAAGATGTTGGCTTGTTTAACTTGTATTTAATGCAAGCAGGCGGCGAACTAGTAACTTCTG
ATAATAAGAAAACAGCATTCAATTCAGAACAAGGTTTAGAAGTGCTTAATTACTGGGATAAAATGCAAAATGATTTAAAA
GTGTACCAACGTGGTTTTGATGATGGTTCCGATGCTTTTGCAGCTGGAAAAGAAGCAATGACATATAACGGACCGTGGGC
TTTAGCAGATTATAATAAAGTAGAAGACCTTGATTATGGTGTAGTCGAACCACCTAAAGGACCAAATGGTGATAAAGGGG
CTATCATGGGCGGATTTGGATTAGTAATGCCTAAACAAGCCGAACACAAAGATGGTGCATGGGACTTTATGAAGTGGTGG
ACAACAAAACCAGAAAATGGTGTAGAATTTGCCAAAATTAGTGGTTGGTTACCAGCGAATAAAATTGCTGCTGAAAATGA
ATACTTTACGAAAGACCCAAATTATTCTGTTTTTGTAAATACAATGAAATACGCTAAAATTCGTCCAACCGTTGCTGGTT
ATGCAGATGTAGAAGGTTTAGCAATGAAACCTCAATTTGAAAAATTCATGAATGGTAATATTTCCGCTGAAAAAGCCTTA
TCACAAGCTGAAAAAGAAGGAAACCAAATTTTAAAAGAAGAGAGAGATAAATAA

Upstream 100 bases:

>100_bases
CACCATTCCAGTATTATTTGTATTTATTTTTGCACAAAAATATTTTGTCGAAGGTATCGCGCATAATGGCGGTAAATAAA
CCAAAAAAGGAGTGTATAGG

Downstream 100 bases:

>100_bases
TTGATGAAATGGTCCGAATATGCAAATTTAGCGCAACAAAGTTTAGAAAAATTTTATCTTGCGGATACAAAAGAACAATT
TTTAAATAACTTTTATCCAA

Product: ABC-type sugar transport periplasmic binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKKVLLAILSMVLLLSLAACGGGSDSGKDKDGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLT
GIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDKVKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA
GVKPPTTWDELATAAQKTTKWDGSKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKKTAFNSEQGLEVLNYWDKMQNDLK
VYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWW
TTKPENGVEFAKISGWLPANKIAAENEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKAL
SQAEKEGNQILKEERDK

Sequences:

>Translated_417_residues
MKKVLLAILSMVLLLSLAACGGGSDSGKDKDGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLT
GIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDKVKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA
GVKPPTTWDELATAAQKTTKWDGSKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKKTAFNSEQGLEVLNYWDKMQNDLK
VYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWW
TTKPENGVEFAKISGWLPANKIAAENEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKAL
SQAEKEGNQILKEERDK
>Mature_417_residues
MKKVLLAILSMVLLLSLAACGGGSDSGKDKDGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLT
GIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDKVKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA
GVKPPTTWDELATAAQKTTKWDGSKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKKTAFNSEQGLEVLNYWDKMQNDLK
VYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWW
TTKPENGVEFAKISGWLPANKIAAENEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKAL
SQAEKEGNQILKEERDK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=412, Percent_Identity=24.7572815533981, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790466, Length=316, Percent_Identity=26.2658227848101, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46780; Mature: 46780

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLAILSMVLLLSLAACGGGSDSGKDKDGKEEIVMWGSWSGDQIKQLEKQIDSYNKS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
QDKYKVKYVMQENVEEKLLTGIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDKVK
CHHEEEHHHHHHCHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHHCCCC
MDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEAGVKPPTTWDELATAAQKTTK
HHHHHHHHHHHHHHCCCEECCEEECCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHCC
WDGSKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKKTAFNSEQGLEVLNYWDKMQNDLK
CCCCHHHHHCCCHHHHHHHHEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
VYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNGDKGAIMGGFG
HHHCCCCCCCHHHHCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
LVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANKIAAENEYFTKDPNYSVFVN
EECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCEEEEE
TMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKALSQAEKEGNQILKEERDK
EEHHHEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVLLAILSMVLLLSLAACGGGSDSGKDKDGKEEIVMWGSWSGDQIKQLEKQIDSYNKS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
QDKYKVKYVMQENVEEKLLTGIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDKVK
CHHEEEHHHHHHCHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHHCCCC
MDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEAGVKPPTTWDELATAAQKTTK
HHHHHHHHHHHHHHCCCEECCEEECCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHCC
WDGSKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKKTAFNSEQGLEVLNYWDKMQNDLK
CCCCHHHHHCCCHHHHHHHHEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
VYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNGDKGAIMGGFG
HHHCCCCCCCHHHHCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
LVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANKIAAENEYFTKDPNYSVFVN
EECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCEEEEE
TMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKALSQAEKEGNQILKEERDK
EEHHHEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA