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The map label for this gene is fliM [H]

Identifier: 116872088

GI number: 116872088

Start: 696217

End: 697209

Strand: Direct

Name: fliM [H]

Synonym: lwe0668

Alternate gene names: 116872088

Gene position: 696217-697209 (Clockwise)

Preceding gene: 116872087

Following gene: 116872089

Centisome position: 24.74

GC content: 39.38

Gene sequence:

>993_bases
ATGAGCGATAAATTAAGTCAAGAACAAATTGACGCCCTGCTTTCCCAAATGAGTGAAGGTAAGGTAGTCGATGAAAGTAC
GGAAATTGGCGACTTTGGGCGCTTTCATCCCTATGATTTTCATAAACCAGAGAAATTTGGTGCTGAACACCTCGAAAGCT
TAAAGACAATTGCCTCCGCATTTACGAAAAAAAGTATGGAGTTTATTTCTCAGCGAATTCGGATTCCAATTCATACCGAA
GCAACTCTTGCGGATCAAGTTTCCTTTGCGAGCGGCTATATCGAAACAATGCCGAACGATAGTTACATTTTCTGCATTAT
TGATCTCGGTAATCCGGAACTTGGTCAAATTATTATTGAACTTGATTTAGCCTATATCATTTATATTCACGAATGTTTAT
CAGGTGGAAATCCAAAACGAAAATTAAGCGAGCGCAGACTTTTATCTGTTTTTGAAGAGCTGACGTTGAAATCTAATTTA
GAAAAATTTTGCGAAGCGCTTAGGGATAGTTTTAAATCGGTGCATCCAATCTCACCAGAAATCGTTAATATCGAAACCAA
TCCAGCACTGCTTCGAGTAACGTCACCAAATGACATGATGGCGCTTGTCAGTGTGGATATTAAATCGGAATTTTGGATTA
GCACAATGCGCATCGGCGTCCCATTTTTCTCAGTAGAAGAGATTATGAATAAACTTGAGAATGTCGTAGAGTACACATTT
GATAAACGACGGAATTTTGATGCGGAAGTGGAGCAAGAATTACATCAAGTTGAGAAAGAAGCGCGCATTCGTGTGGGTGA
AATTAAAACAACATGGAAAGAACTTAACATGCTAGAAGTTGGAGATGTACTTCTAACAGAAACCCATATACGCGATACGC
TCAAAGGCTATGTCACCGAGAAATGGAAATTTGAATGTTATATGGGAAAAAGTGGTAACCAAAAAGCCGTTAAATTTATG
CGTCATACCGGGCGAACAGAGCAGGAGAGGTAG

Upstream 100 bases:

>100_bases
TCGGTTACGGCGAAATTTTGACTAAAGATGGCAAAATGTTTGTCAAAATAACCAAATTAGGAGAGGGAAGTTCTTCATGA
GAGCTAGGGAGTGACAAAAA

Downstream 100 bases:

>100_bases
AAGTGGAGCAATTACTAAAGGAAAATATCACGCAAATGGAGCTAGATGTGATAGGAGAAATCGCCAATATTTCGTTTGGC
TCAGCTTCTACGGTCTTATC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFISQRIRIPIHTE
ATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSNL
EKFCEALRDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTF
DKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNMLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFM
RHTGRTEQER

Sequences:

>Translated_330_residues
MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFISQRIRIPIHTE
ATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSNL
EKFCEALRDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTF
DKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNMLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFM
RHTGRTEQER
>Mature_329_residues
SDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFISQRIRIPIHTEA
TLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSNLE
KFCEALRDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTFD
KRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNMLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMR
HTGRTEQER

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38032; Mature: 37901

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASA
CCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FTKKSMEFISQRIRIPIHTEATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCHHHHHHH
LDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSNLEKFCEALRDSFKSVHPISPE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTF
EEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNMLEVGDVLLTETHIRDTLKGYVTE
HHHCCCCHHHHHHHHHHHHHHCEEHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCC
KWKFECYMGKSGNQKAVKFMRHTGRTEQER
CEEEEEEECCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASA
CCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FTKKSMEFISQRIRIPIHTEATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCHHHHHHH
LDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSNLEKFCEALRDSFKSVHPISPE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTF
EEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNMLEVGDVLLTETHIRDTLKGYVTE
HHHCCCCHHHHHHHHHHHHHHCEEHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCC
KWKFECYMGKSGNQKAVKFMRHTGRTEQER
CEEEEEEECCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]