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The map label for this gene is fliN [C]

Identifier: 116872087

GI number: 116872087

Start: 695960

End: 696196

Strand: Direct

Name: fliN [C]

Synonym: lwe0667

Alternate gene names: 116872087

Gene position: 695960-696196 (Clockwise)

Preceding gene: 116872086

Following gene: 116872088

Centisome position: 24.73

GC content: 36.29

Gene sequence:

>237_bases
ATGAAAATTAATCATAATATTCCACTCAGAATCGACTTCGAGCTAGGGCGCACAAAACAGCCAGTTGGTAGTTTGTTAGA
TGTAAAAAAGGGAACCGTTTTTCGGTTAGAAGATTCCACAGCTAATGTGGTTAAAATTACTATTTCTGGCAAATGTATCG
GTTACGGCGAAATTTTGACTAAAGATGGCAAAATGTTTGTCAAAATAACCAAATTAGGAGAGGGAAGTTCTTCATGA

Upstream 100 bases:

>100_bases
ACATATCAAAGTGGTTTCCAAGGGAATACAAAAGTTATTCGTGTTGCGGATGACGTGATGAAACAAATTGTGAACTTGAT
TCAGTAGGGAGTTTAGCTAA

Downstream 100 bases:

>100_bases
GAGCTAGGGAGTGACAAAAAATGAGCGATAAATTAAGTCAAGAACAAATTGACGCCCTGCTTTCCCAAATGAGTGAAGGT
AAGGTAGTCGATGAAAGTAC

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Switch Protein

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKINHNIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS

Sequences:

>Translated_78_residues
MKINHNIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS
>Mature_78_residues
MKINHNIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKMFVKITKLGEGSSS

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8523; Mature: 8523

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINHNIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILT
CEECCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCEEEECCCEEE
KDGKMFVKITKLGEGSSS
CCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKINHNIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILT
CEECCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCEEEECCCEEE
KDGKMFVKITKLGEGSSS
CCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA