| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872084
Identifier: 116872084
GI number: 116872084
Start: 693221
End: 694267
Strand: Direct
Name: 116872084
Synonym: lwe0664
Alternate gene names: NA
Gene position: 693221-694267 (Clockwise)
Preceding gene: 116872083
Following gene: 116872085
Centisome position: 24.63
GC content: 41.07
Gene sequence:
>1047_bases ATGCTAATCCCAGATAATTTGCTACAACCACTTGTCGGAAAAAAACTGATCGAACCAAAAGAAACGTTAGCAGAAGAATT AGTTGAACTACCTTTTATTTCCCTTTTAATGGAAAATAGTCCTGCACCGCTGTTAAAGGAAGACTCGGAAAACTTAGCAC AAGTTAGCCCGCCGTTAAAAGCAATCGCCCAACCACTCGTTTCAGCAAAACTACTTGAAGGTGAGCAGGAGACAAAACTA CCGGATGCGCCACTTGAGCTGAAAGAAGTGAAAGAAACACTTGCGGCAATCGCCAAACAAGCAATTGACCAACCCAAAAT AGAAAGTGCCCCGCAAGTTGTACAGACTCCAGTAACAAATACACCGAAAGAAGCCACAAAAAATGCTACCAGAGAGCAAC AACCGCCACCAGAACTTATCATGCCTACAAAAGAATCACCTAAACTAGCAGAAAACGTGGCAAAAAACCAACCAGTTCTA GCCAAACTACCTCAAGAAAAAGAAGTCGTGCAACTTTTCAAAGCGAGCATTAAAGAACCGGTAACAGCAAAAGAAGAAGT TGCCGTCAAAAAGTCCGCAGAATCCAGCAATATTTGGCATGATACGGCTAAACAGCTCACACCAACCGCAAAAACCGAAG TCCCAGTGACATTAAAACAACTCGATAAAAACATCACGGACCAAATCGAACAGTTGCAAAAATTTCAAGTAAAGCAAAAT AAAGCTTTTTTCGCGATTCAACCAGAATCACTTGGAAAAGTAGAAGTTTTGCTTAAAAAAATGCCTGATAAAATATTTGT ACATATCGAATATCAAGAACAAACAGCGAAACAAAAACTCGAACAAATGGCGCAAGATTTACATAATCGCTTTCGTGACC GAGGTGTGGAAGTAGCCGTAACAATGTCCGAAAAACAAGCGCCAAAAGAAAACGGCCAAGGATCAGAAGGACGACACCAA GGCGAATCTAAGAAAGAGAGAGAACGCGAAAATCCGCATCAAGAAAGAACCAAACAAGAAGCATTTGATTTAGAGGAGGA GACGTAA
Upstream 100 bases:
>100_bases ATGACACACGAAAGAAATGGCAACAGCTTGAAAATAAAAGAGAAGAACAAACATTACGCGATTTAAAAATGGTGCTATTA AAGTAAAAGGGAGGAAAGTC
Downstream 100 bases:
>100_bases TTTGGACGGAATTAGTAGTTTATCTGGAGCAAGTCAGGATACAAATAATGCAGTGACATCTAGCGTATCAAAAACACTTG GGAAAGATGATTTCATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLIPDNLLQPLVGKKLIEPKETLAEELVELPFISLLMENSPAPLLKEDSENLAQVSPPLKAIAQPLVSAKLLEGEQETKL PDAPLELKEVKETLAAIAKQAIDQPKIESAPQVVQTPVTNTPKEATKNATREQQPPPELIMPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKSAESSNIWHDTAKQLTPTAKTEVPVTLKQLDKNITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMSEKQAPKENGQGSEGRHQ GESKKERERENPHQERTKQEAFDLEEET
Sequences:
>Translated_348_residues MLIPDNLLQPLVGKKLIEPKETLAEELVELPFISLLMENSPAPLLKEDSENLAQVSPPLKAIAQPLVSAKLLEGEQETKL PDAPLELKEVKETLAAIAKQAIDQPKIESAPQVVQTPVTNTPKEATKNATREQQPPPELIMPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKSAESSNIWHDTAKQLTPTAKTEVPVTLKQLDKNITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMSEKQAPKENGQGSEGRHQ GESKKERERENPHQERTKQEAFDLEEET >Mature_348_residues MLIPDNLLQPLVGKKLIEPKETLAEELVELPFISLLMENSPAPLLKEDSENLAQVSPPLKAIAQPLVSAKLLEGEQETKL PDAPLELKEVKETLAAIAKQAIDQPKIESAPQVVQTPVTNTPKEATKNATREQQPPPELIMPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKSAESSNIWHDTAKQLTPTAKTEVPVTLKQLDKNITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMSEKQAPKENGQGSEGRHQ GESKKERERENPHQERTKQEAFDLEEET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39067; Mature: 39067
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPDNLLQPLVGKKLIEPKETLAEELVELPFISLLMENSPAPLLKEDSENLAQVSPPLK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHCCCHHH AIAQPLVSAKLLEGEQETKLPDAPLELKEVKETLAAIAKQAIDQPKIESAPQVVQTPVTN HHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC TPKEATKNATREQQPPPELIMPTKESPKLAENVAKNQPVLAKLPQEKEVVQLFKASIKEP CCHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCC VTAKEEVAVKKSAESSNIWHDTAKQLTPTAKTEVPVTLKQLDKNITDQIEQLQKFQVKQN CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCC KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAV CEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TMSEKQAPKENGQGSEGRHQGESKKERERENPHQERTKQEAFDLEEET EECHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIPDNLLQPLVGKKLIEPKETLAEELVELPFISLLMENSPAPLLKEDSENLAQVSPPLK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHCCCHHH AIAQPLVSAKLLEGEQETKLPDAPLELKEVKETLAAIAKQAIDQPKIESAPQVVQTPVTN HHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC TPKEATKNATREQQPPPELIMPTKESPKLAENVAKNQPVLAKLPQEKEVVQLFKASIKEP CCHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCC VTAKEEVAVKKSAESSNIWHDTAKQLTPTAKTEVPVTLKQLDKNITDQIEQLQKFQVKQN CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCC KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAV CEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TMSEKQAPKENGQGSEGRHQGESKKERERENPHQERTKQEAFDLEEET EECHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA