Click here to switch to the map view.

The map label for this gene is fliQ

Identifier: 116872066

GI number: 116872066

Start: 676403

End: 676675

Strand: Direct

Name: fliQ

Synonym: lwe0646

Alternate gene names: NA

Gene position: 676403-676675 (Clockwise)

Preceding gene: 116872065

Following gene: 116872067

Centisome position: 24.04

GC content: 41.03

Gene sequence:

>273_bases
ATGAATTTAACGCCAATTACGCAAATTTTTCAAGATTTTTTCTATAGTGGGCTGGCGCTTATTTTGCCGGTGTCGCTGAT
TTGTATCGTGGTAGTGATTGTGGTAGCGATTTTGATGGCGATGATGCAGATTCAAGACCAATCGCTGACGTTCTTACCGA
AGATAGTTGCCTTTGTAGTCGCGCTCTTTATTCTTGGACCGTGGATGTTTGAACACATGACGGATTTATTTGTAGGAATC
TTTTCCAAATTACCCCTGATGATTAGGGTGTAA

Upstream 100 bases:

>100_bases
TAGCTTACCATTTAAGATTCTTGTTTTTATTTTCATTGGCGGATATGGACTGATTACCAACATGATTTTTCAAACAATTC
ACTTTTAAGGGAGTAGCAAA

Downstream 100 bases:

>100_bases
ACATGGAGTTTGAATTTTTTCTTGCTGTTGTGATTGTTTTTAGCCGTGTTGCTAGTTTTTTATTTTTCTTTCCGCTTTTA
AAAGGGCGTAACATTCCAAA

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: Flagellar Biosynthetic Protein FliQ

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQIQDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGI
FSKLPLMIRV

Sequences:

>Translated_90_residues
MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQIQDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGI
FSKLPLMIRV
>Mature_90_residues
MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQIQDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGI
FSKLPLMIRV

Specific function: Unknown

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10177; Mature: 10177

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQIQDQSLTFLPKIVAFVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALFILGPWMFEHMTDLFVGIFSKLPLMIRV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQIQDQSLTFLPKIVAFVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALFILGPWMFEHMTDLFVGIFSKLPLMIRV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA