Click here to switch to the map view.

The map label for this gene is 116872047

Identifier: 116872047

GI number: 116872047

Start: 663453

End: 663977

Strand: Direct

Name: 116872047

Synonym: lwe0627

Alternate gene names: NA

Gene position: 663453-663977 (Clockwise)

Preceding gene: 116872046

Following gene: 116872052

Centisome position: 23.58

GC content: 35.05

Gene sequence:

>525_bases
ATGCAGACAGATAATATCGTTGTAGTAGATTATGACGAAAATTGGCCAAAAGAATTTCAAAGAATTGAAGCGGCAATTTT
AAATACAATAACTCTAGATGTTCTTCGGGTGGAGCATGTAGGCAGTACTTCCGTTAGAGGTTTATGTGCTAAGCCGATTA
TTGACATTGATATTGTGATAGAAGATTATAGTAGCTTTGAAGCAGTAAAAACTGGACTCTTATCTTTAGGATATGAGCAT
GAGGGCGATTTAGGGATATCCGAGCGGGAAGCTTTTTCTTATGATACTTCACAAAAAAAGTCATTTATGGAACATCATAT
TTATGTTTGTCCAAAAAATTCCGCAGAACTGCATCGCCATCTCACTTTCCGAAATCATTTAAGAAATAACCCATCTGATT
GTCAAAAATATGGAACGATTAAGTTAGCAGCAGCAAAGGAATTTCAAACAGATATAGAGGGATACTTAAATATGAAAGGC
GAAGTCATTACCGAAATCTATCAACGTTGCGGATTAATAAAATAA

Upstream 100 bases:

>100_bases
ACAAAGAGATGGATGAATCGTGGTTGTTAGAGTCATAACGTGGAAAAAATATTAAGTGCAACACTATGTGTATTTTTTGC
ATCGTAAAAGGAGATAGATT

Downstream 100 bases:

>100_bases
CCAGATAAAAAATAGCGGCAATTTTCATGCCGCTATTTTTTATCTGGTTAAATGATAGATACATTAACGAGAATTCAATC
TTCCTCATAGGCATCAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQTDNIVVVDYDENWPKEFQRIEAAILNTITLDVLRVEHVGSTSVRGLCAKPIIDIDIVIEDYSSFEAVKTGLLSLGYEH
EGDLGISEREAFSYDTSQKKSFMEHHIYVCPKNSAELHRHLTFRNHLRNNPSDCQKYGTIKLAAAKEFQTDIEGYLNMKG
EVITEIYQRCGLIK

Sequences:

>Translated_174_residues
MQTDNIVVVDYDENWPKEFQRIEAAILNTITLDVLRVEHVGSTSVRGLCAKPIIDIDIVIEDYSSFEAVKTGLLSLGYEH
EGDLGISEREAFSYDTSQKKSFMEHHIYVCPKNSAELHRHLTFRNHLRNNPSDCQKYGTIKLAAAKEFQTDIEGYLNMKG
EVITEIYQRCGLIK
>Mature_174_residues
MQTDNIVVVDYDENWPKEFQRIEAAILNTITLDVLRVEHVGSTSVRGLCAKPIIDIDIVIEDYSSFEAVKTGLLSLGYEH
EGDLGISEREAFSYDTSQKKSFMEHHIYVCPKNSAELHRHLTFRNHLRNNPSDCQKYGTIKLAAAKEFQTDIEGYLNMKG
EVITEIYQRCGLIK

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 19885; Mature: 19885

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDNIVVVDYDENWPKEFQRIEAAILNTITLDVLRVEHVGSTSVRGLCAKPIIDIDIVI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
EDYSSFEAVKTGLLSLGYEHEGDLGISEREAFSYDTSQKKSFMEHHIYVCPKNSAELHRH
ECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCEEEECCCCHHHHHHH
LTFRNHLRNNPSDCQKYGTIKLAAAKEFQTDIEGYLNMKGEVITEIYQRCGLIK
HHHHHHHCCCHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTDNIVVVDYDENWPKEFQRIEAAILNTITLDVLRVEHVGSTSVRGLCAKPIIDIDIVI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
EDYSSFEAVKTGLLSLGYEHEGDLGISEREAFSYDTSQKKSFMEHHIYVCPKNSAELHRH
ECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCEEEECCCCHHHHHHH
LTFRNHLRNNPSDCQKYGTIKLAAAKEFQTDIEGYLNMKGEVITEIYQRCGLIK
HHHHHHHCCCHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]