Click here to switch to the map view.

The map label for this gene is 116872046

Identifier: 116872046

GI number: 116872046

Start: 662761

End: 663390

Strand: Direct

Name: 116872046

Synonym: lwe0626

Alternate gene names: NA

Gene position: 662761-663390 (Clockwise)

Preceding gene: 116872045

Following gene: 116872047

Centisome position: 23.55

GC content: 34.76

Gene sequence:

>630_bases
TTGAATACAAATGAACAAAAAGTACAAGTTTTAAATAAATTAGTCACGCTTTATGGCTATCAAGATTGGTGGGAAGATGA
TAATCGCCTTTCTGATTGGATTTCGATGATATTAATTCAGCGTACTACAGAGAGAAATGCCAACCAAGCATTAGCGAATC
TCAAGCCTTTTCTAGATTTAGATAGTTTGATGGATATGGATATCATTAAGTTAGAGGAGTTAATATATCCCGCAGGCTTC
TATAAACAAAAAAGCATCTATATCAAGGCATTAATAGAGTGGTTTGTCGGTCACGGAGCTAGCTTTGAGAAGTTTCGTCT
TTATTCAACAGAAGATTTGCGAAAAGAATTACTAGGGATAAAAGGTGTAGGGGAAGAAACTGCAGATGCGATGTTACTTT
ATATTTTTGAACGAAATGTATTTATTGCAGACTTATATGCAAGACGATTATTTTCTCGATTAGGTTTTGGCGAATATAAT
TCTTATGAACAAATGCGGGAAGAGTTTATGCCAATTACAGAAAATATTTCCCATAAATTATGTAAAGAATGGCATTCGGT
CATTGATGTGCACGGGAAGCATTTTGGGAAAGACAAAGAGATGGATGAATCGTGGTTGTTAGAGTCATAA

Upstream 100 bases:

>100_bases
CTGATATGACCGGAAATCGTAATGGTTTTCGAATGATTGGTTGACAAGTGGTTTTGACTTTTAGCAAAGTAGTTGTACTA
GATTCAGAGGTGATAAAACG

Downstream 100 bases:

>100_bases
CGTGGAAAAAATATTAAGTGCAACACTATGTGTATTTTTTGCATCGTAAAAGGAGATAGATTATGCAGACAGATAATATC
GTTGTAGTAGATTATGACGA

Product: endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNTNEQKVQVLNKLVTLYGYQDWWEDDNRLSDWISMILIQRTTERNANQALANLKPFLDLDSLMDMDIIKLEELIYPAGF
YKQKSIYIKALIEWFVGHGASFEKFRLYSTEDLRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYN
SYEQMREEFMPITENISHKLCKEWHSVIDVHGKHFGKDKEMDESWLLES

Sequences:

>Translated_209_residues
MNTNEQKVQVLNKLVTLYGYQDWWEDDNRLSDWISMILIQRTTERNANQALANLKPFLDLDSLMDMDIIKLEELIYPAGF
YKQKSIYIKALIEWFVGHGASFEKFRLYSTEDLRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYN
SYEQMREEFMPITENISHKLCKEWHSVIDVHGKHFGKDKEMDESWLLES
>Mature_209_residues
MNTNEQKVQVLNKLVTLYGYQDWWEDDNRLSDWISMILIQRTTERNANQALANLKPFLDLDSLMDMDIIKLEELIYPAGF
YKQKSIYIKALIEWFVGHGASFEKFRLYSTEDLRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYN
SYEQMREEFMPITENISHKLCKEWHSVIDVHGKHFGKDKEMDESWLLES

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: 4.2.99.18

Molecular weight: Translated: 24772; Mature: 24772

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNEQKVQVLNKLVTLYGYQDWWEDDNRLSDWISMILIQRTTERNANQALANLKPFLDL
CCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
DSLMDMDIIKLEELIYPAGFYKQKSIYIKALIEWFVGHGASFEKFRLYSTEDLRKELLGI
HHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCHHHHHHHHHCC
KGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYNSYEQMREEFMPITENISHKL
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH
CKEWHSVIDVHGKHFGKDKEMDESWLLES
HHHHHHHHHHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MNTNEQKVQVLNKLVTLYGYQDWWEDDNRLSDWISMILIQRTTERNANQALANLKPFLDL
CCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
DSLMDMDIIKLEELIYPAGFYKQKSIYIKALIEWFVGHGASFEKFRLYSTEDLRKELLGI
HHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCHHHHHHHHHCC
KGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYNSYEQMREEFMPITENISHKL
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH
CKEWHSVIDVHGKHFGKDKEMDESWLLES
HHHHHHHHHHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]