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The map label for this gene is 116872036

Identifier: 116872036

GI number: 116872036

Start: 653899

End: 654540

Strand: Direct

Name: 116872036

Synonym: lwe0616

Alternate gene names: NA

Gene position: 653899-654540 (Clockwise)

Preceding gene: 116872035

Following gene: 116872037

Centisome position: 23.24

GC content: 31.15

Gene sequence:

>642_bases
ATGGAAAAACAAACATATGAAAAATTAGCATATTATACAATCAAAGAAAAGATTCTCAGTGGGAAACTTCATGTAGGGCA
ACATATATCAGAAGCGAGTATAGCAAAAGAATTATCCATTAGCAGAACTCCAGTCAGAAAAGCAATCGCTGTTTTAGTAT
CCGAAGAGTTGATTGATTATGAAATAAATCGCGGCGCTATCGTAATAGAAAGCAGTATGAGTGCTGGCCGTTTTATTGAA
TTACTTGAAATGGCTGAAATTCTAGTGGTACAAACTATTGAAAAATGTAAAAATAAAAATCTAACTTATAAACCAGAAAA
AGGAAATGAAATACTTGCAGAAATGCGCCAAATTCAAAAAGAAGAAGATGTAGAAGCCTATTTGTCGTTACTGAGTAAAT
GGTTATTACAATTTATTTCCCAATTAGCAAACATATACGCGGAAGATATTGTACGGAAAATGAAGCGTGATTTCTTTAAT
AAAGCGCAAAAAGATATTAAAATGATTCCTGTGCTTTTAGAAAATGAAACGATGGAAACATTAGAACAACTTTCCACTTA
TATGGTTGAAAAGAAACATGATTTAGCAAAAGAGGTAATACAAAAATTGATGAATTTGTATATTATCCGTACATTTAGAT
AG

Upstream 100 bases:

>100_bases
TTTGCACTAATTCTTTTGTTTACGTTATTAATTACAACGGGAGTAACAGTAATTTTTTGGCGTAGAAAATACTTTTAAAT
AGAGAAATTGGGGGATGGAC

Downstream 100 bases:

>100_bases
TATTTCTAAAATGATTTGCTTAAAAAAAGGAGGTGCTTTTGATGCGGAAAGTATATGAAATTTTTATTTTAGACTGGCGC
CGTCTCTTTAAAGCGCCTTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator; GntR Family Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEKQTYEKLAYYTIKEKILSGKLHVGQHISEASIAKELSISRTPVRKAIAVLVSEELIDYEINRGAIVIESSMSAGRFIE
LLEMAEILVVQTIEKCKNKNLTYKPEKGNEILAEMRQIQKEEDVEAYLSLLSKWLLQFISQLANIYAEDIVRKMKRDFFN
KAQKDIKMIPVLLENETMETLEQLSTYMVEKKHDLAKEVIQKLMNLYIIRTFR

Sequences:

>Translated_213_residues
MEKQTYEKLAYYTIKEKILSGKLHVGQHISEASIAKELSISRTPVRKAIAVLVSEELIDYEINRGAIVIESSMSAGRFIE
LLEMAEILVVQTIEKCKNKNLTYKPEKGNEILAEMRQIQKEEDVEAYLSLLSKWLLQFISQLANIYAEDIVRKMKRDFFN
KAQKDIKMIPVLLENETMETLEQLSTYMVEKKHDLAKEVIQKLMNLYIIRTFR
>Mature_213_residues
MEKQTYEKLAYYTIKEKILSGKLHVGQHISEASIAKELSISRTPVRKAIAVLVSEELIDYEINRGAIVIESSMSAGRFIE
LLEMAEILVVQTIEKCKNKNLTYKPEKGNEILAEMRQIQKEEDVEAYLSLLSKWLLQFISQLANIYAEDIVRKMKRDFFN
KAQKDIKMIPVLLENETMETLEQLSTYMVEKKHDLAKEVIQKLMNLYIIRTFR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24822; Mature: 24822

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQTYEKLAYYTIKEKILSGKLHVGQHISEASIAKELSISRTPVRKAIAVLVSEELIDY
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EINRGAIVIESSMSAGRFIELLEMAEILVVQTIEKCKNKNLTYKPEKGNEILAEMRQIQK
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EEDVEAYLSLLSKWLLQFISQLANIYAEDIVRKMKRDFFNKAQKDIKMIPVLLENETMET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LEQLSTYMVEKKHDLAKEVIQKLMNLYIIRTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKQTYEKLAYYTIKEKILSGKLHVGQHISEASIAKELSISRTPVRKAIAVLVSEELIDY
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EINRGAIVIESSMSAGRFIELLEMAEILVVQTIEKCKNKNLTYKPEKGNEILAEMRQIQK
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EEDVEAYLSLLSKWLLQFISQLANIYAEDIVRKMKRDFFNKAQKDIKMIPVLLENETMET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LEQLSTYMVEKKHDLAKEVIQKLMNLYIIRTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA