| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is manR [H]
Identifier: 116872017
GI number: 116872017
Start: 633161
End: 635191
Strand: Direct
Name: manR [H]
Synonym: lwe0597
Alternate gene names: 116872017
Gene position: 633161-635191 (Clockwise)
Preceding gene: 116872013
Following gene: 116872018
Centisome position: 22.5
GC content: 34.02
Gene sequence:
>2031_bases ATGTTAAGTGGCAGAATGATATTAATCATCAAGTATTTAGAAGGCAGAAGTGAATCAAGTATTCGTGATATTAGTAAAAA GCTCGAAATATCTGAGCGAAAAGTAAGGTATGATATCGACAATATTAATGATGCACTTACGCTTAATCAATTAGAACCAA TTCTGAAGGAGGGAAAAGGGAGATTAGTTATACCAGCTGATTTGGCCAAATTAGCGCTAGAGGAAAAAGAAGCTTATATT TTTGCTCCACAAGAAAGAATCAATATTTTGAAGTATTTGCTATTTTTTAATATTAAAAAGGTGAACTTGGAACATTTAAG TAAGTGGATGTATGTTTCGCGAACCACGATAAAAAAAGACTTATTGCTGATTGAAGATCATTTACAAAAGTCGAATCTCC AATTGGTTTATAAACAAGGCTATAGATTAACTGGTAATGAAAACGCTCTCTTGAATGAGCGTGTCCGGATTTCGCGTGAT TATATTGATTTTATCCAAAATGAAGACACAGAAACAAACTTTTATAAGAAATGTATGTTAAGTGAAATGAAAGTGTCGCT TAAAAATATTGATATGAATGGCGTGAATAAGTGGTCTAAGCAACTTTTGAAACAAATGGGTTGGATTTTAAATGATGAAT CGTATTACTGGTATTTAGCGAATATTTTAGTCTTTTGTTGGTATATAAAAAACGATGTAGCTAATCCACTCAAAGACGCA AAGCTTGTACTGCCGATTTTTAATTCTCAGTTAATTCAAGGTATAGAAGTGATTTTGGATTATGAGCTTAGTCAGGAACA ATTAAATATTCTAGTTGGATTCGTTTTCTTCACGAATAAGTATGCAAGCTTGAATGAAGAAATGGACTTGATTACAACAG AAACCTTAGTAAATTCATTGATTAATTCCATGAGCGAAGAACTTAATTTACCTTTTTTAGAAGATGCGATTTTGTATAAA GGATTACTCAACCATGTTGCGCCGCTTATAGAGCGAGTGAGAGGGAATGTGCAGATTTATGAAGATACCTTTGATGTTAT TCCAACAGAATTTCTCTATATTTTACAAGCAACAAGCAAGGTGGTTAAAACTATTCCGTTACTGGAAAGTGTCGAAAATG AGAGCGAAATATCTTTGTTGGCGATTCATTTTTTAGCGAGTATCCAGCGTAATCAGCGTGAGGAGAAATTGCATATACTG CTTGTTTGTGGTCTAGGATACGGGGCAATTGCAATGATGAAAGATACGTTAAACAGCGAGTATCAAATCGCTTTTGTTGC AACTATTCCTGAATATATGTTAAAAGATTTCACTGCTTGGGAAGAAGTTGATTTAGTCATTACAACAGCGAAAGTGACGA TACCTTTACCAAAGCCAACTGTCAAAGTAAGTCCCGTTTTAAAAGAATGTGATTTAGTGGAGTTGGAGAAGCAAGGTTTA AAAAAGAAGAATATTTTGACAAGTTATTTTGCGATTAATAAACGACTCAGCTTTCTTGACAGTGCCGTAAAGCAACAAGT GGTTAGTATTATTAAAGAAGAGCTTGGTTATGGGCATGTTAGTATTCCGAATCGAAAGTTAGGACTCAGTGATTTAATTG GAACTGACGCAATTCAGATTACAGCAGAGCATTTAACATGGCAAGACGCGATTCAGCAGGCAACGAAGCTACTATCTGAT AATCATTTCGTTCTCCCGGCATATGCAGAGAATATCAAACAAATTCAAGAAGAGTTAGGTTTCTATTCAGTGAAAGATGA GGAGTTCGCTCTATTTCACGGCAATGATAGTAATTTGGTTCAAATGAATAGCATGGCACTTTTAATTAACAAACAGCCGG TTATATTTGGAGAGAAGCAAGCCAAAGTCATTTTTATTCTCGCCAGTAAAGATAAAAAAGAGCAAATTCCAGCAATTATC ACATTAACTAAAATGACCTATCAAACAGATTTTATTTCCAAATTAGAACAAGCAAAAAATCCAATTGATGCTGATAGAAT TATAAAAAAATATGAAGAGGAGGTTAGATGA
Upstream 100 bases:
>100_bases TATTATGTAAATTGTGGAAGTGCTTACACGGCGGTAACATGGAGTTAGGAGCAAGCCTTCTAAATCATTTTATCGCAACT AGTATAAAGAGGTGATAGAG
Downstream 100 bases:
>100_bases TATGGGCGTGAAAATCGACTTCTTGTCTATTTCAAACATGGATTTAAATACTAAAGAAGAGGCGATTCTACAATTAGTTA ATGTGTTAGAAAAAGCTGAT
Product: transcriptional antiterminator, putative
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MLSGRMILIIKYLEGRSESSIRDISKKLEISERKVRYDIDNINDALTLNQLEPILKEGKGRLVIPADLAKLALEEKEAYI FAPQERINILKYLLFFNIKKVNLEHLSKWMYVSRTTIKKDLLLIEDHLQKSNLQLVYKQGYRLTGNENALLNERVRISRD YIDFIQNEDTETNFYKKCMLSEMKVSLKNIDMNGVNKWSKQLLKQMGWILNDESYYWYLANILVFCWYIKNDVANPLKDA KLVLPIFNSQLIQGIEVILDYELSQEQLNILVGFVFFTNKYASLNEEMDLITTETLVNSLINSMSEELNLPFLEDAILYK GLLNHVAPLIERVRGNVQIYEDTFDVIPTEFLYILQATSKVVKTIPLLESVENESEISLLAIHFLASIQRNQREEKLHIL LVCGLGYGAIAMMKDTLNSEYQIAFVATIPEYMLKDFTAWEEVDLVITTAKVTIPLPKPTVKVSPVLKECDLVELEKQGL KKKNILTSYFAINKRLSFLDSAVKQQVVSIIKEELGYGHVSIPNRKLGLSDLIGTDAIQITAEHLTWQDAIQQATKLLSD NHFVLPAYAENIKQIQEELGFYSVKDEEFALFHGNDSNLVQMNSMALLINKQPVIFGEKQAKVIFILASKDKKEQIPAII TLTKMTYQTDFISKLEQAKNPIDADRIIKKYEEEVR
Sequences:
>Translated_676_residues MLSGRMILIIKYLEGRSESSIRDISKKLEISERKVRYDIDNINDALTLNQLEPILKEGKGRLVIPADLAKLALEEKEAYI FAPQERINILKYLLFFNIKKVNLEHLSKWMYVSRTTIKKDLLLIEDHLQKSNLQLVYKQGYRLTGNENALLNERVRISRD YIDFIQNEDTETNFYKKCMLSEMKVSLKNIDMNGVNKWSKQLLKQMGWILNDESYYWYLANILVFCWYIKNDVANPLKDA KLVLPIFNSQLIQGIEVILDYELSQEQLNILVGFVFFTNKYASLNEEMDLITTETLVNSLINSMSEELNLPFLEDAILYK GLLNHVAPLIERVRGNVQIYEDTFDVIPTEFLYILQATSKVVKTIPLLESVENESEISLLAIHFLASIQRNQREEKLHIL LVCGLGYGAIAMMKDTLNSEYQIAFVATIPEYMLKDFTAWEEVDLVITTAKVTIPLPKPTVKVSPVLKECDLVELEKQGL KKKNILTSYFAINKRLSFLDSAVKQQVVSIIKEELGYGHVSIPNRKLGLSDLIGTDAIQITAEHLTWQDAIQQATKLLSD NHFVLPAYAENIKQIQEELGFYSVKDEEFALFHGNDSNLVQMNSMALLINKQPVIFGEKQAKVIFILASKDKKEQIPAII TLTKMTYQTDFISKLEQAKNPIDADRIIKKYEEEVR >Mature_676_residues MLSGRMILIIKYLEGRSESSIRDISKKLEISERKVRYDIDNINDALTLNQLEPILKEGKGRLVIPADLAKLALEEKEAYI FAPQERINILKYLLFFNIKKVNLEHLSKWMYVSRTTIKKDLLLIEDHLQKSNLQLVYKQGYRLTGNENALLNERVRISRD YIDFIQNEDTETNFYKKCMLSEMKVSLKNIDMNGVNKWSKQLLKQMGWILNDESYYWYLANILVFCWYIKNDVANPLKDA KLVLPIFNSQLIQGIEVILDYELSQEQLNILVGFVFFTNKYASLNEEMDLITTETLVNSLINSMSEELNLPFLEDAILYK GLLNHVAPLIERVRGNVQIYEDTFDVIPTEFLYILQATSKVVKTIPLLESVENESEISLLAIHFLASIQRNQREEKLHIL LVCGLGYGAIAMMKDTLNSEYQIAFVATIPEYMLKDFTAWEEVDLVITTAKVTIPLPKPTVKVSPVLKECDLVELEKQGL KKKNILTSYFAINKRLSFLDSAVKQQVVSIIKEELGYGHVSIPNRKLGLSDLIGTDAIQITAEHLTWQDAIQQATKLLSD NHFVLPAYAENIKQIQEELGFYSVKDEEFALFHGNDSNLVQMNSMALLINKQPVIFGEKQAKVIFILASKDKKEQIPAII TLTKMTYQTDFISKLEQAKNPIDADRIIKKYEEEVR
Specific function: May regulate the expression of the mannose operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 77807; Mature: 77807
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGRMILIIKYLEGRSESSIRDISKKLEISERKVRYDIDNINDALTLNQLEPILKEGKG CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHEEEECCCCCCCEEHHHHHHHHHCCCC RLVIPADLAKLALEEKEAYIFAPQERINILKYLLFFNIKKVNLEHLSKWMYVSRTTIKKD CEEECHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH LLLIEDHLQKSNLQLVYKQGYRLTGNENALLNERVRISRDYIDFIQNEDTETNFYKKCML HHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SEMKVSLKNIDMNGVNKWSKQLLKQMGWILNDESYYWYLANILVFCWYIKNDVANPLKDA HHHHHHHHCCCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KLVLPIFNSQLIQGIEVILDYELSQEQLNILVGFVFFTNKYASLNEEMDLITTETLVNSL EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHH INSMSEELNLPFLEDAILYKGLLNHVAPLIERVRGNVQIYEDTFDVIPTEFLYILQATSK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCHHHHHHHHHHHHH VVKTIPLLESVENESEISLLAIHFLASIQRNQREEKLHILLVCGLGYGAIAMMKDTLNSE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCC YQIAFVATIPEYMLKDFTAWEEVDLVITTAKVTIPLPKPTVKVSPVLKECDLVELEKQGL EEEEEEECCHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEECHHHHHCCHHHHHHCCC KKKNILTSYFAINKRLSFLDSAVKQQVVSIIKEELGYGHVSIPNRKLGLSDLIGTDAIQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCEEE TAEHLTWQDAIQQATKLLSDNHFVLPAYAENIKQIQEELGFYSVKDEEFALFHGNDSNLV EHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCEE QMNSMALLINKQPVIFGEKQAKVIFILASKDKKEQIPAIITLTKMTYQTDFISKLEQAKN EECCEEEEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC PIDADRIIKKYEEEVR CCCHHHHHHHHHHHCC >Mature Secondary Structure MLSGRMILIIKYLEGRSESSIRDISKKLEISERKVRYDIDNINDALTLNQLEPILKEGKG CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHEEEECCCCCCCEEHHHHHHHHHCCCC RLVIPADLAKLALEEKEAYIFAPQERINILKYLLFFNIKKVNLEHLSKWMYVSRTTIKKD CEEECHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH LLLIEDHLQKSNLQLVYKQGYRLTGNENALLNERVRISRDYIDFIQNEDTETNFYKKCML HHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SEMKVSLKNIDMNGVNKWSKQLLKQMGWILNDESYYWYLANILVFCWYIKNDVANPLKDA HHHHHHHHCCCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KLVLPIFNSQLIQGIEVILDYELSQEQLNILVGFVFFTNKYASLNEEMDLITTETLVNSL EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHH INSMSEELNLPFLEDAILYKGLLNHVAPLIERVRGNVQIYEDTFDVIPTEFLYILQATSK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCHHHHHHHHHHHHH VVKTIPLLESVENESEISLLAIHFLASIQRNQREEKLHILLVCGLGYGAIAMMKDTLNSE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCC YQIAFVATIPEYMLKDFTAWEEVDLVITTAKVTIPLPKPTVKVSPVLKECDLVELEKQGL EEEEEEECCHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEECHHHHHCCHHHHHHCCC KKKNILTSYFAINKRLSFLDSAVKQQVVSIIKEELGYGHVSIPNRKLGLSDLIGTDAIQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCEEE TAEHLTWQDAIQQATKLLSDNHFVLPAYAENIKQIQEELGFYSVKDEEFALFHGNDSNLV EHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCEE QMNSMALLINKQPVIFGEKQAKVIFILASKDKKEQIPAIITLTKMTYQTDFISKLEQAKN EECCEEEEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC PIDADRIIKKYEEEVR CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]