| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872011
Identifier: 116872011
GI number: 116872011
Start: 628380
End: 629120
Strand: Direct
Name: 116872011
Synonym: lwe0591
Alternate gene names: NA
Gene position: 628380-629120 (Clockwise)
Preceding gene: 116872010
Following gene: 116872012
Centisome position: 22.33
GC content: 34.14
Gene sequence:
>741_bases ATGGATATCATAACATACTTTCTGATTGCACTGAGTACAAGTGTAGTTGGAAGTTTCCTAGGCATTGGCGGCGGAGTAAT TCTTTTGCCGATTCTGTTATTAATGGGTATTTCTCAAGGAACAGCAGCTTTTAGTTCTGCCCTGACTGTTTTTACAATGG CAATTTTTACCTGTAGTATTTATTATAAACGGAAACAAGGGAATGTAGTGTTAGCACTAAAAATAGCTGTAACTAGTATT CCAACTACTTTTCTTGGGGCAATGGTTAACCAAATGTTGCCAGAATCGGTTTATCGTTTTATGTATGGGGCGTTAATAGT TACTTTATTGTTATTAATGTTTTGGAAGAAAAAGCGTAATAACGAAAAACCTCATTTTTTAAGTAAATATCGAATTATGC CTTATTTATTTGGAGTGATAATTGGGTTTTTAGCTGGGTTATTTGGAATTGGGGGCGGTCCAATTGTTATACCAATTTTA TTACTCATTTTCATGCTAAATCAAAAAACTGCATCTGCGACATCAAGTTATGTGACGCTACTTACTTCGATGGCGAGTAT TGGCTCATACGCGATTATTGGCGGTAGTGATTTTTCGATTGGTATTTATATGATACCAGGAGCTATACTAGGAGCTCTAA TTGGAACAAGATTAAATAAACTGTTGGATGAAAAATGGATTGCTATTCTTTTCAACATTTTACTTGTAGCCCTTTTTGCC TTAAATTTAATTAAAATTTAA
Upstream 100 bases:
>100_bases TTTAAATTCAAAAGACAATAGCTTATTGTCTTTTTTTAGTACTTTTTATAACAGCGAAATATGTTAAGCTGATAAAGGGA AAAGAAGAGAGGGAAGAAAG
Downstream 100 bases:
>100_bases CGATTTACAAGCTGCAAAAATTAGCTTGTTTTTTGTTGTGACGCAATTTTATGTTAAGCTTAGAGAGAGTAGGAGGGGTT ATGATGAAAAGGAACTGGCA
Product: integral membrane protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGISQGTAAFSSALTVFTMAIFTCSIYYKRKQGNVVLALKIAVTSI PTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMFWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPIL LLIFMLNQKTASATSSYVTLLTSMASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFA LNLIKI
Sequences:
>Translated_246_residues MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGISQGTAAFSSALTVFTMAIFTCSIYYKRKQGNVVLALKIAVTSI PTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMFWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPIL LLIFMLNQKTASATSSYVTLLTSMASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFA LNLIKI >Mature_246_residues MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGISQGTAAFSSALTVFTMAIFTCSIYYKRKQGNVVLALKIAVTSI PTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMFWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPIL LLIFMLNQKTASATSSYVTLLTSMASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFA LNLIKI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26654; Mature: 26654
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGISQGTAAFSSALTVFTMAIFTCSI CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YYKRKQGNVVLALKIAVTSIPTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMFWKKKRN HEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASATSSYVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH LTSMASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFA HHHHHHHCCEEEECCCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLIKI HHHHCC >Mature Secondary Structure MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGISQGTAAFSSALTVFTMAIFTCSI CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YYKRKQGNVVLALKIAVTSIPTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMFWKKKRN HEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASATSSYVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH LTSMASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFA HHHHHHHCCEEEECCCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLIKI HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA